Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0986 ATGGCTTCTTCCATTAATGGAGCTTGCAATCATGTATTTACATTGAATCACGTCCAACTTTCAAGCCCTCATAATCAACCCAATGGTACTACTTCTATTCATGATCACAAAGACAAGCCTGAAACCAAAACGATTCCAACAATCGATTACACCCAAAGGGCTCAATGGCTCCGAGCAGCTGTGCTAGGTGCAAACGATGGGCTAGTCTCTGTCTCGTCATTAATGATGGGGATCGGAGCAGTAAAACCCGACATAAAAGCCATGCTCCTTGCCGGGTTTGCTGGGCTTGTCGCTGGGGCCTGCAGTATGGCTATTGGAGAGTTCGTGTCTGTGTACACCCAAAGAGACATAGAAAAAGCTGAGATCAAAAGAAACAAGATGAGAAAAAATTGTAACAATATTACTATCGTATCTCAAGATCTTAAGGTGGAAAAAAAAGAAGAAGAAACCAAGGAGGAGGAGGACGAGAAAGAAACTAAGTTACCAAACTCGGCACAGGCAGCAGCAGCATCGGCTTTCGCATTTTCTATCGGGGCGGTGGTGCCTTTGATGGCTGCGGCCTTCGTGAAGGACTATAGGATGAGAATGGGGGTGGTGGTGGTGGTGGCTAGCTTGGCATTGGTGGGGTTTGGGTGTATAGGTGCAAGGCTCGGTCGGGTTCCGGCTGGAAAGTCTTGTGCTAGGGTTCTTGTTGGTGGGTTAATGGCTATGGGAATTTCTTTTGGTCTTACTAAATTGATGGGGAATACTACTGGGTTTGAACTGTATTGA 771 46.3 MASSINGACNHVFTLNHVQLSSPHNQPNGTTSIHDHKDKPETKTIPTIDYTQRAQWLRAAVLGANDGLVSVSSLMMGIGAVKPDIKAMLLAGFAGLVAGACSMAIGEFVSVYTQRDIEKAEIKRNKMRKNCNNITIVSQDLKVEKKEEETKEEEDEKETKLPNSAQAAAASAFAFSIGAVVPLMAAAFVKDYRMRMGVVVVVASLALVGFGCIGARLGRVPAGKSCARVLVGGLMAMGISFGLTKLMGNTTGFELY 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9217846 9218616 + Conep08aG0101400.1 Cone8ag0986 443535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0986 256 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 248 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cone8ag0986 256 MobiDBLite consensus disorder prediction 20 43 - -
Cone8ag0986 256 MobiDBLite consensus disorder prediction 144 163 - -
Cone8ag0986 256 MobiDBLite consensus disorder prediction 144 161 - -
Cone8ag0986 256 Pfam VIT family 57 244 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone8ag0986 256 Coils Coil 136 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0955 Cone-Chr12:8257753 Cone8ag0986 Cone-Chr8:9217846 7.13E-128 dispersed
Cone8ag0983 Cone-Chr8:9195614 Cone8ag0986 Cone-Chr8:9217846 2.39E-58 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0986 K22736 - csv:101214875 241.506