Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0989 ATGGCCGCCCTCAGCTTGTTTACGTTTCTGTTTAAGATTGTAATGATCACCATTTTAATGGGGAATGTGAATAGGATGATCTCTCATTCTCAAGCCCAATTAAGGGTCGGTTTCTATGCGCAAACATGTCCTAACGCAGAATCCATTGTCCGAGCCGTAGTCGGAGACGCCGCTTCTTCAGACGCCAATTTGGCAGCCGTTTTGCTCCGACTCCATTTTCACGACTGCTTTGTCGAGGGGTGTGACGGTTCGATTCTGATTGAAAACGGGCCGGGCGTTGAGAAAACGGCGTTTGGGCACCAAGGGGTGGGAGGTTTTGATGTGATAGAGAAGGCCAAACTGGAGTTGGAACAAGCGTGTCGAGGCACCGTTTCATGCGCTGATATTGTGGCTTTAGCTGCTCGAGAAGCCATTGTTCTGGCAGGTGGACCGGGATACAAGGTTCCGACAGGTCGGAGAGATGGTCGGGTTTCGAATGTATCGCTTGCAGACGGCATGCCGGATGTGAACGACTCCGTTCAGACGCTAAGGACTAGATTCTTACAGAAGGGTTTAACAGATAAGGACCTTGTCCTGCTCAGTGGCGGACACACAATTGGCACTTCAGCTTGCCAGTTTTTTAGTTACAGGCTCTACAACTTCTCAACAACAACTGCGACCGGGGCGGACCCCTCCATAAACCCCGCATTCGTTTCTCAACTCCGAACACTCAGCCTGCAAAACGGCGACGGGACTAGTCGGGTCGCGTTGGACACCAGAAGTGTCAACACATTCGATACATCTTACTTTGCAAACTTGAAGAACGGACGTGGGATTTTGGAGTCGGATCAAAAGCTATGGACGGACTCCACAACTCAAACGTTTGTCCAACGCTATTTGGGAGTGAGAGGCTTCTTGGGTTTGACATTCAATGTAGAGTTCGGAAAATCCATGGTGAAGATGAGCAACATCGGTGTTAAGACGGGGACTGTGGGTGAAATTCGTAAGATTTGCTCCGCAGTTAACTGA 1008 49.8 MAALSLFTFLFKIVMITILMGNVNRMISHSQAQLRVGFYAQTCPNAESIVRAVVGDAASSDANLAAVLLRLHFHDCFVEGCDGSILIENGPGVEKTAFGHQGVGGFDVIEKAKLELEQACRGTVSCADIVALAAREAIVLAGGPGYKVPTGRRDGRVSNVSLADGMPDVNDSVQTLRTRFLQKGLTDKDLVLLSGGHTIGTSACQFFSYRLYNFSTTTATGADPSINPAFVSQLRTLSLQNGDGTSRVALDTRSVNTFDTSYFANLKNGRGILESDQKLWTDSTTQTFVQRYLGVRGFLGLTFNVEFGKSMVKMSNIGVKTGTVGEIRKICSAVN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9230218 9319037 + Conep08aG0101700.1 Cone8ag0989 443538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0989 335 FunFam Peroxidase 167 314 - -
Cone8ag0989 335 Pfam Peroxidase 50 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 FunFam Peroxidase 37 176 - -
Cone8ag0989 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cone8ag0989 335 SUPERFAMILY Heme-dependent peroxidases 33 335 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 CDD secretory_peroxidase 33 334 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag0989 335 Gene3D Peroxidase, domain 2 167 314 - -
Cone8ag0989 335 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PANTHER PEROXIDASE 25-RELATED 20 331 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0989 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
Cone8ag0989 335 Gene3D - 37 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0989 Cone-Chr8:9230218 Cone8ag0991 Cone-Chr8:9325373 3.07E-136 dispersed
Cone8ag0989 Cone-Chr8:9230218 Cone8ag0990 Cone-Chr8:9320744 4.01E-125 tandem
Cone12ag0958 Cone-Chr12:8270317 Cone8ag0989 Cone-Chr8:9230218 5.17E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0989 K00430 - vvi:100246878 397.512