Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0990 ATGTCGCTATTCATTTTCATTGCCGCCACGGTGCAAAGCCAAGGAACTCGTGTGGGGTTCTATTTGAAAAAATGTCCTAGAGCCGAATCTATTGTTAGGTCAACGGTCGGAGCTCATTTCAAGACCGATCCAACTGTTGCTCCTGGTCTCTTAAGAATGCACTTCCATGACTGCTTTGTTCAAGGTTGCGACGGTTCTGTCCTCATTAGCGGGCCTGGCACCGAGAAAACTGCTGGTCCTAATCTCGGATTAAGAGGATATGAAGTTATTGATGATGCCAAAACCCAGCTTGAAGCTGCTTGCCCTGGTGTTGTCTCTTGTGCTGACATTCTTGCTCTTGCTGCTCGCGACTCCGTCGTTCTGACGAAAGGCGTTAGTTGGTCAGTGCCTACCGGACGCAGAGATGGTAGGATCTCTCGAGCATCCGGCGCAGCCAATTTGCCTGGATTTACAGAATCAGTTGCGGTTCAAAAGCAAAAGTTTGCTGCACTAGGTCTCAACACTCAAGACCTTGTTACCCTTGTTGGGGGACACAGTATTGGGACAACTGCTTGTCAATTCTTCAGCAATAGGTTATATAATTTCACAACGGCAGGAAGTGGCGCCGACCCGTCAGTTGCGCCGTCGTTCGTTTTTACCATGAGATCACTCTGCCCACAAAATGGCGACGCCACAAAGCGGGTCGAGCTTGATAACAGAAGCCAAACCAAGTTTGACACGTCATTTTATGCAAATTTGAGGAGTGGCCGAGGAGTGCTCGAGTCGGACCAAAAGCTGTGGACTGATGTTTCTACTAGATCATTTGTACAAGGTTTCTTAGGTGTCAAGGGAACAAAGAACTTGAACTTGAACTTGGAATTTGGAAAATCAATGGTGAAGATGAGTAACATTGGAGTGAAAACCGGAAGAAATGGTGAAATTAGAAAAATTTGCTCCGCAATAAACTGA 948 46.73 MSLFIFIAATVQSQGTRVGFYLKKCPRAESIVRSTVGAHFKTDPTVAPGLLRMHFHDCFVQGCDGSVLISGPGTEKTAGPNLGLRGYEVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGVSWSVPTGRRDGRISRASGAANLPGFTESVAVQKQKFAALGLNTQDLVTLVGGHSIGTTACQFFSNRLYNFTTAGSGADPSVAPSFVFTMRSLCPQNGDATKRVELDNRSQTKFDTSFYANLRSGRGVLESDQKLWTDVSTRSFVQGFLGVKGTKNLNLNLEFGKSMVKMSNIGVKTGRNGEIRKICSAIN 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9320744 9321909 + Conep08aG0101800.1 Cone8ag0990 443539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0990 315 PRINTS Haem peroxidase superfamily signature 47 61 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 CDD secretory_peroxidase 17 314 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag0990 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
Cone8ag0990 315 Pfam Peroxidase 32 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PANTHER PEROXIDASE 25-RELATED 12 311 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone8ag0990 315 Gene3D - 19 315 - -
Cone8ag0990 315 FunFam Peroxidase 148 294 - -
Cone8ag0990 315 ProSitePatterns Peroxidases active site signature. 47 58 IPR019794 GO:0004601(InterPro)
Cone8ag0990 315 FunFam Peroxidase 19 160 - -
Cone8ag0990 315 Gene3D Peroxidase, domain 2 148 294 - -
Cone8ag0990 315 ProSiteProfiles Plant heme peroxidase family profile. 15 315 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 49 69 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 25 44 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0990 315 SUPERFAMILY Heme-dependent peroxidases 17 315 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0961 Cone-Chr12:8336470 Cone8ag0990 Cone-Chr8:9320744 2.55E-195 dispersed
Cone8ag0990 Cone-Chr8:9320744 Cone8ag0992 Cone-Chr8:9328359 7.05E-154 dispersed
Cone8ag0989 Cone-Chr8:9230218 Cone8ag0990 Cone-Chr8:9320744 4.01E-125 tandem
Cone8ag0990 Cone-Chr8:9320744 Cone8ag0991 Cone-Chr8:9325373 3.77E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0990 K00430 - rcu:8258720 486.493