Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag0993 ATGTCGAGATTCATCTTCATCGCCGCCATGTTTTTGGCCGCGGCTTTCACCACAGTGCACGGCCAAGGACTACGTGTAGGGTTCTATTCCCAAACATGTCCTAATGCCGAATCAATAATTAGGTCAACAGTTGAAGATCTTTTGAAGACCGATAACAGAACCGCTCCCCGTCTCTTAAGAATGCACTTCCACGACTGCTTTGTCCTGGGTTGTGACGCTTCCGTCCTCCTCAACGGCACCGACACCGAGAAAACTTCTTTCCCTAATCAAGGGTTAAGAGGATATGAACTTGTTGATGAGATCAAAACCCGGCTTGAAGCAGCATGCCCTGGCGTTGTCTCTTGCGCTGATATTCTTGCTCTTGCCGCCCGTGACGCTGTCGTGCTGACTAGGGGGACAACTTGGGCAGTGCCTACTGGACGTAGAGATGGTAAAATCTCCCGAGCGGCTGACTCGTTAGACTTGCCTGGATTTAACGACGCCGTTGCCGCTCAGAAGCGAAAGTTCGCTGCCGTCGGACTCGACACTAAAGACATGGTTACCCTTGTCGGATCGCACTCTATTGGAACCACTGCATGCTTTATTTTTAGGTATAGAATATACAATTTTACTGGAACCGGAAACGGTACTGACCCATCTATAGCGCCGTCCTTCGCTGCTACCATGTCACAAATCTGCCCAAGAGATGGAGATCCGGGCAAGAGGATCAGCCTAGATTATGGTAGCCAACTGGAATCTAGTGAGTCGTTTTATGCAAACTTGAGGGACGGGCGAGGAGTGCTCGAGTCGGACCAAAATCTATGGGGTGATGCAGAAACAAGATCAATTGCACAAGGTTTCTTGGGTGGTAGCGGTTCTCAAAAGTTGAACTTCCACGCAGAGTTTGCAAAAGCAATGGTGAAGATGGGTAACATTGCACCCAAGACCGGAACTGAAGGCGAAATCCGGAAAGTTTGTTCTGCCGGAAACTAA 972 49.38 MSRFIFIAAMFLAAAFTTVHGQGLRVGFYSQTCPNAESIIRSTVEDLLKTDNRTAPRLLRMHFHDCFVLGCDASVLLNGTDTEKTSFPNQGLRGYELVDEIKTRLEAACPGVVSCADILALAARDAVVLTRGTTWAVPTGRRDGKISRAADSLDLPGFNDAVAAQKRKFAAVGLDTKDMVTLVGSHSIGTTACFIFRYRIYNFTGTGNGTDPSIAPSFAATMSQICPRDGDPGKRISLDYGSQLESSESFYANLRDGRGVLESDQNLWGDAETRSIAQGFLGGSGSQKLNFHAEFAKAMVKMGNIAPKTGTEGEIRKVCSAGN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9332894 9340898 - Conep08aG0102100.1 Cone8ag0993 443542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag0993 323 PANTHER PEROXIDASE 25-RELATED 15 319 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone8ag0993 323 FunFam Peroxidase 156 302 - -
Cone8ag0993 323 Gene3D - 27 323 - -
Cone8ag0993 323 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag0993 323 Gene3D Peroxidase, domain 2 156 302 - -
Cone8ag0993 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Cone8ag0993 323 FunFam Peroxidase 27 167 - -
Cone8ag0993 323 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 Pfam Peroxidase 40 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag0993 323 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cone8ag0993 323 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0991 Cone-Chr8:9325373 Cone8ag0993 Cone-Chr8:9332894 4.06E-136 dispersed
Cone8ag0993 Cone-Chr8:9332894 Cone8ag1449 Cone-Chr8:11205720 5.95E-85 dispersed
Cone8ag0992 Cone-Chr8:9328359 Cone8ag0993 Cone-Chr8:9332894 3.58E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag0993 K00430 - rcu:8258720 406.757