Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1043 ATGTTGGAATCATTAACCTGTTTCCAGAGCTCGAAAGGATATGATATTATTAAGCAAAGGAATCCAATTGGGGTTAACTCATACACTAGTTCAAGATTTTATACTTATTCTTGCTATAAGAAAGAATCATTATCTACCACGAAAAACAGCATAAATCATTACTGTTCTGTCTCCAGAGTCGTCCATAATGATACTTCAACCCTATTTGCCTCGAAATCTGTTTGGAGATTCTACTACTTACAGAACCACAAACCGTGCGCTAGAGAAAGATTCCTAGCATATTCAACTCTTGACGTTGCCAGTGCAGTTGATGTCATCAATGATTTAGGATTGGATACATTGACATTTCTAGCCGTTACAGTCATGGTTGTACCTGCATTCAGGATAATCAAAGCTAGCCCTATACTGGGTTTCTTCTTTGCTGGAGTTGTGCTCAATCAGTTTGGTGTAATTAGAAATCTTACAGATGTTAAAGTTCTTTCTGAGTGGGGGATCCTTTTCTTGTTATTTGAGATGGGCTTAGAACTTTCATTTGCACGGCTAAAAGCTCTTGCAAAATTTGCCTTTGGCATGGGACTGACACAGGTCGTGTTATGTACTCTTGCTTTCACAGCATTTGAGCTTCCACCTAATGGAGCCATTGGAACAAGAATTTTGGAGTTCCTTTTTCACTCGCGGTCTGACTTGGTTAACATCAGAAGCATTGATGAAGCTATAGTGATAGGTGCTGCTCTCTCTCTGTCTTCTTCTGCTTTTGTTCTTCAGCTTCTTGCAGAGAAAGGTGAGCTTCCAACAAGATTTGGGTCGGCAACTTTGGGAATTCTTCTCTTACAGGACATTGCAGTTGTCCCTCTCTTAGTTATACTTCCGGTTCTAGAGAGTCAGAATTTGGTAGAGGAAAGTGTTTGGCCAATGCTTGCTAAAGAAAGTTTGAAGGCCTTGGGAGGACTGGGTCTGCTTTCTCTTGGAGGGAAGTATCTTCTTAGGCGAGTTTTTGAGTTTGTGGCAGAAGCAAGGAGCTCGGAAGCTTTTGTTGCTCTTTGCCTACTTACAGTTGCTGGCACTTCGCTTGTCACCCAGAAGTTGGGCTTCAGTGATACACTTGGAGCATTTTTGGCCGGGGCATTATTAGCTGAAACTAATTTCAGGACACAAATCGAAGCAGATATCAGGCCCTTTAGAGGTTTACTCCTTGGGTTATTCTTTGTGACCACAGGAACTTCCATTGATATGCAGCTTCTTTTGCGAGAATGGCCAAATGTACTCTCACTCTTAGCAGGTTTAATTGTTATCAAGACACTGATAATAACAGCCATAGGACCCCGTGTGGGGCTCACACTACAAGAAAGTGTCAGAATAGGATTACTTCTATCACAAGGAGGCGAGTTTGGATTTGTAGTTTTTTCTCTAGCAAACAGGCTTGGAGTGCTTCCACTTGAGCTTAACAAGCTTCTCATAATCGTTGTTGTGCTTTCTATGGCATTAACCCCATTGCTTAATGACGCTGGAAGAAAGGCAGCCGAATTAATAGATCAAAAGCTTGAGGAAGCTGATAAAGCTCCGGACATGGCTAATTTTGATGCTGCTGAACCTGTAGTCATTCTTGGATTTGGACAAATGGGCCAGGTGCTTGCGAATTTCTTATCTGCCCCATTAGCTTCTGGAGGAGAGGGCGATGTTGCGGGATGGCCTTATGTAGCTTTTGATCTTGACCCTTCTGTTGTTAAAGCATCTAGAGACCTTGGTTTTCCTACTCTTTATGGGGATGGATCAAGACCAGCCGTTCTTCAATCTGCTGGAATATCTTGCCCAAAAGCTGTCATGGTTATGTACACAGGCCGGAACAGAACAATGGAAGCTGTTCAGAGGCTTAGATCTGCTTTCCCTGCCATCCCAATATATGCAAGAGCGCAAGACCTTGTTCATCTCTTAGAGCTAAAGAAAGCGGGTGCAACAGATGCCATTCTGGAAGATGCCGAAACAAGTTTACAGCTAGGCTCTAAGCTCTTGAAGGGGCTGGGTGTGATGTCAGATGATGTCACTTTTCTGAGTCAGCTTGTTCGGGATTCAATGGAGTTACAAGCTCAAGAAGCACTTGACAAAACCAACGAACAAGATTTAGATTCCATGAAGCCATTACAGGTGCGAGTTGGTGATTTAATTGGTACTCGATTGCCCGCTTTGGTTTCACCGGGAGAAAAAATGTTACTGGTGAATCAGACTGCAGATTCTCATATCTTACGGATTCAAAAGGAAGCAGAGGGTGATTCTGAGATTAAGCTGTCTCCTAATGATTTAGAAGATGGGAAGGGAGTTTTGTATTGTGAACTTGATGCAACAGACAATAATAACAATTTCTCCATTAACTCTGATGAAAAGGAGGAGAAAAATGTTGTCGACCAGTCAATCCCGTACATTACGGCCGTTGCGGAAGAATCATCATAA 2445 42.49 MLESLTCFQSSKGYDIIKQRNPIGVNSYTSSRFYTYSCYKKESLSTTKNSINHYCSVSRVVHNDTSTLFASKSVWRFYYLQNHKPCARERFLAYSTLDVASAVDVINDLGLDTLTFLAVTVMVVPAFRIIKASPILGFFFAGVVLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAKFAFGMGLTQVVLCTLAFTAFELPPNGAIGTRILEFLFHSRSDLVNIRSIDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVEESVWPMLAKESLKALGGLGLLSLGGKYLLRRVFEFVAEARSSEAFVALCLLTVAGTSLVTQKLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLLREWPNVLSLLAGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNDAGRKAAELIDQKLEEADKAPDMANFDAAEPVVILGFGQMGQVLANFLSAPLASGGEGDVAGWPYVAFDLDPSVVKASRDLGFPTLYGDGSRPAVLQSAGISCPKAVMVMYTGRNRTMEAVQRLRSAFPAIPIYARAQDLVHLLELKKAGATDAILEDAETSLQLGSKLLKGLGVMSDDVTFLSQLVRDSMELQAQEALDKTNEQDLDSMKPLQVRVGDLIGTRLPALVSPGEKMLLVNQTADSHILRIQKEAEGDSEIKLSPNDLEDGKGVLYCELDATDNNNNFSINSDEKEEKNVVDQSIPYITAVAEESS 814
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9593958 9598955 + Conep08aG0107100.1 Cone8ag1043 443592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1043 814 FunFam Glutathione-regulated potassium-efflux system protein KefB 529 701 - -
Cone8ag1043 814 Gene3D - 531 702 - -
Cone8ag1043 814 FunFam K(+) efflux antiporter 3, chloroplastic 108 507 - -
Cone8ag1043 814 Pfam Sodium/hydrogen exchanger family 119 500 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone8ag1043 814 ProSiteProfiles RCK N-terminal domain profile. 531 663 IPR003148 GO:0006813(InterPro)
Cone8ag1043 814 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 532 670 IPR036291 -
Cone8ag1043 814 Gene3D - 108 507 IPR038770 -
Cone8ag1043 814 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 45 795 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
Cone8ag1043 814 Pfam TrkA-N domain 532 655 IPR003148 GO:0006813(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1094 Cone-Chr18:8008730 Cone8ag1043 Cone-Chr8:9593958 2.49E-79 dispersed
Cone4ag1656 Cone-Chr4:12461154 Cone8ag1043 Cone-Chr8:9593958 4.97E-28 dispersed
Cone7ag1295 Cone-Chr7:9535397 Cone8ag1043 Cone-Chr8:9593958 3.70E-28 dispersed
Cone12ag1015 Cone-Chr12:8556218 Cone8ag1043 Cone-Chr8:9593958 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1043 K03455 - vvi:100259410 1077.0