Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1061 ATGGGGAAAGCCAGTAAGGATCTTCTGCATTTTGAACATAAGAAATCCTCTTCTTCACCCATAGAATCCACACTTCTCGTTTGTAAAAAAGACTGTGTCTCGAAGAAACCTCATCCCAATCAAAATCCCACTACAACTTCAGTTCCCGAAAGTCAAGTTTTGGGAAAAGTGAAAGACTTCTTAGGAATCTTCTCGAAAGCTAATGAGAGGTTGCTACTTGATGCAAAGGACCATTCTGATAACTACGATATTGAAGTGCTCACTGGGAACGAATCAGAAGTTATCGAAATGGATTTGATGTTGGGCATAGCTGATCTCCATACCCCGGAAGCTGTCTCTGCTGCTGAGTCAGCAATTTCTGGTTATCAGCCAGTGATTTCATTAGCCGGTGAAAGCGGTGAATCCGAATCAGAAGAAGATACCCATGATGATGATGATGATGATGATGGCAGCACTTCTTCCGACAGAAATGAGAATGAAGATCACAAGAGGAGCTATGATAATAATGATGAGGGCTGTTCTATAGTGAAAAACCTCAAAAGATCCAAGCCAGTCAAGGACAATTCTTCCGGGAAAAAGCTAGCAAATAAGAGGTTGAAAATCATCGAGCTTTCTTAA 618 41.26 MGKASKDLLHFEHKKSSSSPIESTLLVCKKDCVSKKPHPNQNPTTTSVPESQVLGKVKDFLGIFSKANERLLLDAKDHSDNYDIEVLTGNESEVIEMDLMLGIADLHTPEAVSAAESAISGYQPVISLAGESGESESEEDTHDDDDDDDGSTSSDRNENEDHKRSYDNNDEGCSIVKNLKRSKPVKDNSSGKKLANKRLKIIELS 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9659636 9661523 - Conep08aG0109000.1 Cone8ag1061 443610

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1061 205 MobiDBLite consensus disorder prediction 1 21 - -
Cone8ag1061 205 MobiDBLite consensus disorder prediction 155 193 - -
Cone8ag1061 205 PANTHER SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED 2 204 IPR027921 GO:0000492(PANTHER)|GO:0000492(InterPro)|GO:0062064(PANTHER)
Cone8ag1061 205 MobiDBLite consensus disorder prediction 1 17 - -
Cone8ag1061 205 Pfam NOP protein chaperone 1 54 159 IPR027921 GO:0000492(InterPro)
Cone8ag1061 205 MobiDBLite consensus disorder prediction 129 193 - -
Cone8ag1061 205 MobiDBLite consensus disorder prediction 133 154 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1061 K26142 - - vvi:100262735 200.675
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1027 Cone-Chr12:8606330 Cone8ag1061 Cone-Chr8:9659636 3.42E-97 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g789 . . . . Bpe07g00297 . . Bma12g00308 . . . . . . . . . . . . . . . . . . . . . . . Cone12ag1027 Cone8ag1061 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010681 0 2 0 2 1 1 1 0 1 1 1 0 0 1 1 1 0 2 1 1 1 1 1 1 2 1 1 3 1 2 31