Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1067 ATGGCGTTAGAATGTATCAGTTATCTAAAACGGAATCCTTTAAACGTACTTCTATTCATTCTTTTCTCTGCCAAGCTAGCTTTTGGTGGCACCATTGTCAAGCATTTGCCAGGATTCCATGGTGAACTTCCTTTCACGCTTGAAACAGGGTACGTGACGGTGGGTAAATCGGAGATGTTTTATTACTTCATCGAATCAGAAGGAAACCCTAAAGAGGACCCCATTATGCTCTGGTATAGTGGAGGGCCCGGTTGCTCTGTTTGGAATGGACTTATCTATGAAATTGGTCCATTAGCTTTCAATATTACAGCCTATGAAGGAGGTTTGCCGCAACTTTATTATTATCCATATGGTTGGACAAAGACTGCCAGCATACTATTCGTCGATGCACCAGTTGGCACTGGTTTCTCTTATGCTACAGATGCAGCTGATTACTACACCTCCGACACAAAAACAGGATGGCAAGTTTATGGATTCCTAAGAAATTGGTTTGAGGAGCACCCACAATTCCTTTTAGTTCAGTTGTTTGTTGGAGGTGATTCTTACACTGGTTTAACTGCCACCATTGTTGTCAAACATATAATAGATGATAATGATGCGGGCCGTGTTCCGCAATTGAATCTTAAGGGCTATGTTCTTGGAGCCCCCACAACAGATGAAGAAATCACTACAAATGCAAGGATTACAGCCGGTAATCGGTTTGGCCTTATATCAGATGAGCTCTATGAGGCAGCTTATAATAGTTGTAATGGGAATTTCCACGGTGCAAACACATCACAAACCCAATGCTATATAGATCTTTCTTTGATAGAGAGGAACATTAAAGACATAAACCGGATGTGTTTTCTCGAGCCAAAATGCACATGGGCATCCCCAAAGCAGGAGCCAAATGGTGAATCCGATAGAAGATCTCTAGAAGAAGAAGACGATGAAGAAGAAGAAAACTTTAAAAACTTCATCTTATCACCTCCTAGAATCCCCGAGCTTTGGTGCCGTAACTTCAATTATGCTCTTTCTTACATATGGATGAACAACGGCGATGTGCGACAGGCTCTCAACATACGAAAGAATACAATATATGATTGGAAGAGATGCAACAAGAGCCTAGCGTACACAAAAGATGTAAGCAGTGTGGTGGATATTCATCGCTATCTTAGTACAAAGGGATTGCAAGTTCTAATATTCAATGGTGATCATGATCTCGTGGTACCAAGCATCGGTACCCAACAATGGATTAAGTTATTGAACCTAACCATTGTAAACGCTTGGAGACAATGGCTTGTTGATGGTCAAATTGTTGGATATACGATCAAGTATTCGGAGAATGGATACCGCTTAACCTATGCGACGGTTAAGGGGACTGGTCATACACCTCCGGAATACAAGCGTAGAGAATCCTATGAAATGTATGATAGGTTTATCCACTACTATCCACTCTAA 1440 41.39 MALECISYLKRNPLNVLLFILFSAKLAFGGTIVKHLPGFHGELPFTLETGYVTVGKSEMFYYFIESEGNPKEDPIMLWYSGGPGCSVWNGLIYEIGPLAFNITAYEGGLPQLYYYPYGWTKTASILFVDAPVGTGFSYATDAADYYTSDTKTGWQVYGFLRNWFEEHPQFLLVQLFVGGDSYTGLTATIVVKHIIDDNDAGRVPQLNLKGYVLGAPTTDEEITTNARITAGNRFGLISDELYEAAYNSCNGNFHGANTSQTQCYIDLSLIERNIKDINRMCFLEPKCTWASPKQEPNGESDRRSLEEEDDEEEENFKNFILSPPRIPELWCRNFNYALSYIWMNNGDVRQALNIRKNTIYDWKRCNKSLAYTKDVSSVVDIHRYLSTKGLQVLIFNGDHDLVVPSIGTQQWIKLLNLTIVNAWRQWLVDGQIVGYTIKYSENGYRLTYATVKGTGHTPPEYKRRESYEMYDRFIHYYPL 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9691283 9694403 + Conep08aG0109600.1 Cone8ag1067 443616

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1067 479 Gene3D alpha/beta hydrolase 30 295 IPR029058 -
Cone8ag1067 479 Pfam Serine carboxypeptidase 37 475 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1067 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 473 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cone8ag1067 479 SUPERFAMILY alpha/beta-Hydrolases 33 478 IPR029058 -
Cone8ag1067 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1067 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1067 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1067 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1067 479 FunFam Serine carboxypeptidase-like 19 27 293 - -
Cone8ag1067 479 FunFam Carboxypeptidase 330 479 - -
Cone8ag1067 479 MobiDBLite consensus disorder prediction 290 315 - -
Cone8ag1067 479 Gene3D - 331 478 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1067 K16296 - - rcu:8273844 608.601
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1056 Cone-Chr10:7350554 Cone8ag1067 Cone-Chr8:9691283 4.92E-153 dispersed
Cone12ag1035 Cone-Chr12:8656140 Cone8ag1067 Cone-Chr8:9691283 0 dispersed
Cone8ag1067 Cone-Chr8:9691283 Cone8ag1070 Cone-Chr8:9706691 1.36E-139 dispersed
Cone8ag1066 Cone-Chr8:9685925 Cone8ag1067 Cone-Chr8:9691283 7.90E-237 tandem
Cone8ag1067 Cone-Chr8:9691283 Cone8ag1068 Cone-Chr8:9696866 1.51E-133 tandem
Cone12ag1039 Cone-Chr12:8680342 Cone8ag1067 Cone-Chr8:9691283 9.94E-34 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g744 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag1036 Cone8ag1067 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0023714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3