Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1070 ATGGGGTGGTTGCATTTAGTCGCTGCATTTGTTCTACTCAGTCATGCCACGGTAGAGTCGGGCTCCATTGTCAAAACTCTTCCGGGATACCCCGGCAAACTTCCGTTCAAATTAGAAACTGGGTATCTGAGTGTGGGGGACCTGGATGATATTCAGCTATTCTACTACTTCATCGAGTCTACAAGAAACCCTGTAACTGACCCTCTTCTTCTTTGGCTCACCGGAGGACCCGGTTGCTCCGGTTTCTCCGGCCTTGTTTATGAAATTGGCCCATTGAAGTTTGACTATCTTACTTTCAATGGAACCTTGCCTTCTCTGCTTATAAACAAACACGCATGGACCAATGTTGCGAACATAATATTCATAGATTCACCAGTGGGTACTGGATTCTCCTACTCTGAGACACAGGAAGGTTATCATTCATCCGACACTCTAACCGTAGAAGCCCTTTATAAATTCCTTAATAAGTGGTTACTGGATCATCCAGATTTTATAGAAAATCCACTCTACATAACTGGTGATTCTTATTCCGGAATCATCATTCCCCAGCTCACTCTTGCGATATCTAATGCTAACATTGAAGGACACAAACCATATTTAAACCTCCAAGGATATACAGTTGGTAATCCGGTGACCGATTTGCACGACGATGAGAATTCAAGAATCAAATATTTTTTTCGGGTCTCGCTTATTTCGGAAGAACTCTATCTGTCAGCTGTAGAGAATTGCGGTAATGAATTTGTCACTCCGGATGGAACCAACTCATCTTGTATAGATGATATTGGACTTATAGCAGAGTGCACATTAAAGGTCAACGATGGTCAAATATTGGAACCAAAGTGTAGTTTTGCTGCTCCAAAACCTAAAAACAGTTTGAAATGGAATTCAAATTTTCTCGAAGACATCCCGGACGAGATAATCCGCTCGCCGGTCACACCCCCAGAAAATTGGTGTCGAATGCATGATTATGTGCTCTCTTACGTCTGGGCAAATGATCCAAGGGTTCAACTAGCTCTCCACATCCGTAATGGAACGATTACAGATTGGAAGAGATGCAATAAGACCTTGGATTACGATAGCAACGTTTCGAGCTCCGTCTCGTATCATTTGGAGCTTATGTCTAGAGGTTATAGAGCTTTAGCTTACAGTGGGGACCACGACATGATGATTCCATACGTGGGAACGTTAGGATGGATAAGTTCTCTCAATATGACTGTTGTTGATGGGTGGAGGCCCTGGTTTGTTCACGGTCAAATTGCCGGGTTTACAGAGAAATACGTTTTAGGAATTGGAGATGGAATGACCTTTGCAACTATAAAGGGAGCAGGTCATACAGCGCCGGAGTACAAGCCTAAGCAATCCCTTGCCATGGCCGATAGATGGTTCTCCTATTATTCCCTTTGA 1404 43.38 MGWLHLVAAFVLLSHATVESGSIVKTLPGYPGKLPFKLETGYLSVGDLDDIQLFYYFIESTRNPVTDPLLLWLTGGPGCSGFSGLVYEIGPLKFDYLTFNGTLPSLLINKHAWTNVANIIFIDSPVGTGFSYSETQEGYHSSDTLTVEALYKFLNKWLLDHPDFIENPLYITGDSYSGIIIPQLTLAISNANIEGHKPYLNLQGYTVGNPVTDLHDDENSRIKYFFRVSLISEELYLSAVENCGNEFVTPDGTNSSCIDDIGLIAECTLKVNDGQILEPKCSFAAPKPKNSLKWNSNFLEDIPDEIIRSPVTPPENWCRMHDYVLSYVWANDPRVQLALHIRNGTITDWKRCNKTLDYDSNVSSSVSYHLELMSRGYRALAYSGDHDMMIPYVGTLGWISSLNMTVVDGWRPWFVHGQIAGFTEKYVLGIGDGMTFATIKGAGHTAPEYKPKQSLAMADRWFSYYSL 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9706691 9710262 + Conep08aG0109900.1 Cone8ag1070 443619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1070 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1070 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1070 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1070 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1070 467 Pfam Serine carboxypeptidase 28 463 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cone8ag1070 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 461 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cone8ag1070 467 Gene3D alpha/beta hydrolase 24 466 IPR029058 -
Cone8ag1070 467 SUPERFAMILY alpha/beta-Hydrolases 24 464 IPR029058 -
Cone8ag1070 467 FunFam Serine carboxypeptidase-like 19 17 287 - -
Cone8ag1070 467 FunFam Carboxypeptidase 317 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1039 Cone-Chr12:8680342 Cone8ag1070 Cone-Chr8:9706691 7.79E-112 dispersed
Cone6ag0413 Cone-Chr6:1993505 Cone8ag1070 Cone-Chr8:9706691 8.70E-36 dispersed
Cone7ag1433 Cone-Chr7:10173412 Cone8ag1070 Cone-Chr8:9706691 6.56E-56 dispersed
Cone8ag1067 Cone-Chr8:9691283 Cone8ag1070 Cone-Chr8:9706691 1.36E-139 dispersed
Cone8ag1068 Cone-Chr8:9696866 Cone8ag1070 Cone-Chr8:9706691 2.34E-150 dispersed
Cone8ag1070 Cone-Chr8:9706691 Cone9ag0436 Cone-Chr9:2016707 1.33E-07 dispersed
Cone8ag1069 Cone-Chr8:9700799 Cone8ag1070 Cone-Chr8:9706691 3.10E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1070 K16296 - rcu:8273849 646.351