Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1104 ATGGGTAGCACTGAAGCTGAGAGAACAGTTACAGGACTTGCAGCGAAAGACCCATCTGGGATTCTTTCTCCCTACACTTATACTCTCAGAAACACAGGCCCAGATGATGTCTACCTCAAAGTGATCTGCTGTGGAATCTGCCATTCTGATCTCCATCAGATCAAAAATGAGCTCGGCATGTCCAACTATCCCATGGTTCCTGGGCATGAAGTGGTGGGTGAGGTTGTAGAGGTGGGATCCAATGTTACTCGGTTCAGAGAAGGTGACGTGATCGGAGTCGGCTGCATCGTTGGATCTTGCTCCGGGTGTTCGCCTTGCACTTCAGACAAAGAGCAGTACTGCAACAAGAAAATCTGGACCTACAACGATGTCTACACCGACGGAAAGCCCACTCAAGGTGGCTTCGCCCCCGCCATGGTCGTTCACCAAAATTTTGTGGTGAAAATACCAAAAGGGATGACACCGGAACAGGCAGCGCCGTTGCTGTGTGCTGGAGTGACTGTGTTTAGCCCACTGAGCCATTTCGGACTGAAGCAGAGCGGGCTGAGAGGAGGGATTTTGGGCTTGGGAGGTGTAGGTCATATGGGGGTTAAGGTAGCCAAGGCATTGGGTCACCATGTGACTGTCATAAGCTCTTCCGACAAGAAGAGAGAAGAAGCCTTGAACCATCTCGGGGCGGACGAGTATTTGGTTAGCTCCGACTCGAATCGGATGCAAGAAGCTACTGAATCACTGGATTACATCATCGATACAGTGCCTGTAAATCACGCTCTCGAGCCATACCTGTCTTTGCTCAAGCTCGAAGGGAAATTGATCTTGATGGGTGTCATTAATTCCCCTCTGCAATTTGTTTCTCCTATGCTCATGCTTGGGAGGAAATCTATAACAGGGAGTTTTATAGGGAGCATGAAAGAGACTCAAGAAATACTCGATTTCTTCAAGGAGAAGGATATGACCTCCATGATTGAAGTTATAAAGCTTGATTACATTAACAAGGCGTTTGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTTGTCGTTGATGTTGCTGGAAGCAAGCTTGATAAGTGA 1074 47.95 MGSTEAERTVTGLAAKDPSGILSPYTYTLRNTGPDDVYLKVICCGICHSDLHQIKNELGMSNYPMVPGHEVVGEVVEVGSNVTRFREGDVIGVGCIVGSCSGCSPCTSDKEQYCNKKIWTYNDVYTDGKPTQGGFAPAMVVHQNFVVKIPKGMTPEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKREEALNHLGADEYLVSSDSNRMQEATESLDYIIDTVPVNHALEPYLSLLKLEGKLILMGVINSPLQFVSPMLMLGRKSITGSFIGSMKETQEILDFFKEKDMTSMIEVIKLDYINKAFERLEKNDVRYRFVVDVAGSKLDK 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9854077 9857016 + Conep08aG0113500.1 Cone8ag1104 443653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1104 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cone8ag1104 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Cone8ag1104 357 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Cone8ag1104 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Cone8ag1104 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cone8ag1104 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cone8ag1104 357 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cone8ag1104 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cone8ag1104 357 PANTHER ALDEHYDE REDUCTASE 8 352 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cone8ag1104 357 Gene3D - 14 350 - -
Cone8ag1104 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 317 IPR036291 -
Cone8ag1104 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cone8ag1104 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1038 Cone-Chr13:8609558 Cone8ag1104 Cone-Chr8:9854077 1.12E-08 dispersed
Cone8ag0863 Cone-Chr8:8528538 Cone8ag1104 Cone-Chr8:9854077 1.36E-117 dispersed
Cone8ag1104 Cone-Chr8:9854077 Cone9ag1351 Cone-Chr9:10131797 6.02E-68 dispersed
Cone12ag1069 Cone-Chr12:8816572 Cone8ag1104 Cone-Chr8:9854077 3.76E-244 wgd
Cone3ag1002 Cone-Chr3:28822246 Cone8ag1104 Cone-Chr8:9854077 2.62E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1104 K00083 - csv:101222395 588.956