Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag1124 | ATGGCAAGCAACGATCAAGATCAGCAAGATCAAGCCAGCAGGCATCAGGAAGTTGGCCACAAAAGCCTTTTGCAGAGTGATGCCCTTTACCAGTATATTCTTGAGACTAGTGTGTACCCAAGAGAGCCTGAGTCCATGAAAGAGCTTAGAGAAGTGACTGCCAAACATCCATGGAATATAATGACAACTTCAGCTGATGAAGGACAGTTTCTAAACCTGCTTCTGAAACTGATTAATGCTAAGAACACGATGGAGATTGGTGTGTATACTGGATACTCACTCCTCGCCACTGCTCTTGCTCTTCCTGATGATGGAAAGATTTTGGCTATGGACATAAACAGGGAGAATTATGAACTGGGTCTTCCGATCATCGAGAAGGCCGGTGTGGCCCACAAGATCGATTTCCGTGAAGGCCCCGCCCTCCCTGTCCTAGATCAGATGGTCGAAAATGAGAGAAACCATGGGAGTTTTGATTTTATCTTTGTGGACGCCGACAAGGATAATTACATCAACTACCACAAGAGGCTGATTGATCTGGTCAAAGTTGGGGGTCTGATCGGCTACGACAACACCCTCTGGAACGGTTCGGTAGTGGCTGCACCGGATGCGCCGCTGAGGAAGTACGTTAGGTATTATAGAGACTACGTGCTGGAGTTCAACAAGGCTCTTGCTGCTGATCCTAGGATTGAGATCTGCATGCTCCCTGTTGGCGATGGGATCACTCTCTGCCGTCGGACAGGATGA | 744 | 48.12 | MASNDQDQQDQASRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELREVTAKHPWNIMTTSADEGQFLNLLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPIIEKAGVAHKIDFREGPALPVLDQMVENERNHGSFDFIFVDADKDNYINYHKRLIDLVKVGGLIGYDNTLWNGSVVAAPDAPLRKYVRYYRDYVLEFNKALAADPRIEICMLPVGDGITLCRRTG | 247 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 9929186 | 9930686 | - | Conep08aG0115500.1 | Cone8ag1124 | 443673 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag1124 | 247 | Pfam | O-methyltransferase | 35 | 245 | IPR002935 | GO:0008171(InterPro) | |
| Cone8ag1124 | 247 | CDD | AdoMet_MTases | 85 | 186 | - | - | |
| Cone8ag1124 | 247 | PANTHER | O-METHYLTRANSFERASE-RELATED | 19 | 245 | IPR050362 | GO:0008757(PANTHER) | |
| Cone8ag1124 | 247 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 26 | 245 | IPR029063 | - | |
| Cone8ag1124 | 247 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 15 | 247 | - | - | |
| Cone8ag1124 | 247 | Gene3D | Vaccinia Virus protein VP39 | 11 | 246 | IPR029063 | - | |
| Cone8ag1124 | 247 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 22 | 246 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag0996 | Cone-Chr14:8251496 | Cone8ag1124 | Cone-Chr8:9929186 | 1.10E-47 | dispersed | |
| Cone3ag1185 | Cone-Chr3:30530874 | Cone8ag1124 | Cone-Chr8:9929186 | 7.58E-161 | dispersed | |
| Cone7ag1143 | Cone-Chr7:8595412 | Cone8ag1124 | Cone-Chr8:9929186 | 4.26E-91 | dispersed | |
| Cone8ag1124 | Cone-Chr8:9929186 | Cone19ag0420 | Cone-Chr19:3480860 | 4.39E-76 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag1124 | K00588 | - | mdm:103448267 | 452.595 |