Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag1134 | ATGGGATTCCCCTTCATTGGTCAAACCCTCCAACTCTACTCTCAAGACCCAAATTTCTTCTTCTCTTCCAAGCAAAAAAAATATGGAGAAATATTTAAAAGCCATATACTTGGCTGCCCATGTGTGATGGTAGCAAGTCCAGAGGCAGCACGGTTTGTGCTAGTCACTCACGCTCACTTGTTCAAGCCAACTTACCCTAAATGCAAAGAGACTTTGATTGGCCCCTCTGCAATCTTCTTCCACCAAGGAAACTACCATTCGCTTATTAGAAAGCTTGTTCAGAACTCTCTATCACTGGACAGAATCTGGAAGCGGATTCCCGACATTGAGGCCATCGCCGATTCCGTCCTCCACTCTTGCGCCGCGGCCGGTCAATCAGTTAACACCTTTCTTGAAATGAAGAAGTTCTCTTTTGATGTGGGGATTCTAGCTATATTTGGCGAATTGGATGGTAATTGCAAGAAAAAGCTAAAGGAGAATTACTGCATACTAAATAAAGGCTACAATTCTTTTCCTACAAATATACCAGGAACCGCATATTCCAAGGCACTTTTGGCAAGGAAGGGGCTGAGTGAGATTCTGGGTGAGATAATAAGCGAGAGGAAGGAGAAGAGATTAGCGGAGAAGGATTTGCTGGGCCATCTTCTAAACTCAAAAGGCGAAAAGGGTCAGGCTTTGACTAATGATCAGATTGCTGATAACATAATTGGAGTATTGTTTGCTGCTCAGGACACAACAGCTAGTGTTATTACATGGATTCTTAAGTACCTTAACGATGATCGAAAACTTTTCGAGGCCGTTAAGGCAGAGCATATAGAAATATATGAAGCAAATGATAGAGGAAAGAAGCACTTGACTTGGACTCAGATCAAACACATGCCTCTCACTTATAGAGTTGTGTTAGAGAGCTTAAGGATGGCAAGCGTTATTTCTTTCACTTTTAGGGAGGCAGTGGTTGATGTTGAATATCAAGGATACCTGATACCAAAGGGTTGGAAAGTGATGCCTTTATTCAGGAATATTCATCATAACCCAGATTTTTTCTCTGATCCTCATCATTTTGATCCCTCTAGATTTGAGGTAGCTCCGAAGCCCAATACATTTATGCCATTTGGCAATGGTGTTCATGCTTGTCCTGGAAATGAGCTGGCCAAACTAGAGATTCTCGTCTTAATCCACCACCTTGTTACCAAATTCAGGTGGGAGGTAGAGGGATCTCATAGTGGGATCCAGTACGGCCCATTTCCAGTGCCTCAACATGGGCTTCCCGCCACATTTTGGAAAGAGCCCAATACTACTACTCCCTCTTCTTAA | 1314 | 43.0 | MGFPFIGQTLQLYSQDPNFFFSSKQKKYGEIFKSHILGCPCVMVASPEAARFVLVTHAHLFKPTYPKCKETLIGPSAIFFHQGNYHSLIRKLVQNSLSLDRIWKRIPDIEAIADSVLHSCAAAGQSVNTFLEMKKFSFDVGILAIFGELDGNCKKKLKENYCILNKGYNSFPTNIPGTAYSKALLARKGLSEILGEIISERKEKRLAEKDLLGHLLNSKGEKGQALTNDQIADNIIGVLFAAQDTTASVITWILKYLNDDRKLFEAVKAEHIEIYEANDRGKKHLTWTQIKHMPLTYRVVLESLRMASVISFTFREAVVDVEYQGYLIPKGWKVMPLFRNIHHNPDFFSDPHHFDPSRFEVAPKPNTFMPFGNGVHACPGNELAKLEILVLIHHLVTKFRWEVEGSHSGIQYGPFPVPQHGLPATFWKEPNTTTPSS | 437 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 9977254 | 9979415 | + | Conep08aG0116500.1 | Cone8ag1134 | 443683 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag1134 | 437 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 371 | 380 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone8ag1134 | 437 | Pfam | Cytochrome P450 | 3 | 405 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | FunFam | Abscisic acid 8 | 1 | 428 | - | - | |
| Cone8ag1134 | 437 | SUPERFAMILY | Cytochrome P450 | 2 | 427 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | P450 superfamily signature | 241 | 258 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | P450 superfamily signature | 369 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | P450 superfamily signature | 298 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | CDD | CYP90-like | 25 | 423 | - | - | |
| Cone8ag1134 | 437 | Gene3D | Cytochrome P450 | 1 | 428 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PANTHER | CYTOCHROME P450 26 | 1 | 408 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 297 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 368 | 378 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 378 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 230 | 247 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone8ag1134 | 437 | PRINTS | E-class P450 group I signature | 337 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone8ag1134 | Cone-Chr8:9977254 | Cone9ag0347 | Cone-Chr9:1528409 | 9.36E-189 | dispersed | |
| Cone12ag1091 | Cone-Chr12:8915820 | Cone8ag1134 | Cone-Chr8:9977254 | 7.04E-303 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag1134 | K09843 | - | vvi:100246968 | 685.256 |