Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1134 ATGGGATTCCCCTTCATTGGTCAAACCCTCCAACTCTACTCTCAAGACCCAAATTTCTTCTTCTCTTCCAAGCAAAAAAAATATGGAGAAATATTTAAAAGCCATATACTTGGCTGCCCATGTGTGATGGTAGCAAGTCCAGAGGCAGCACGGTTTGTGCTAGTCACTCACGCTCACTTGTTCAAGCCAACTTACCCTAAATGCAAAGAGACTTTGATTGGCCCCTCTGCAATCTTCTTCCACCAAGGAAACTACCATTCGCTTATTAGAAAGCTTGTTCAGAACTCTCTATCACTGGACAGAATCTGGAAGCGGATTCCCGACATTGAGGCCATCGCCGATTCCGTCCTCCACTCTTGCGCCGCGGCCGGTCAATCAGTTAACACCTTTCTTGAAATGAAGAAGTTCTCTTTTGATGTGGGGATTCTAGCTATATTTGGCGAATTGGATGGTAATTGCAAGAAAAAGCTAAAGGAGAATTACTGCATACTAAATAAAGGCTACAATTCTTTTCCTACAAATATACCAGGAACCGCATATTCCAAGGCACTTTTGGCAAGGAAGGGGCTGAGTGAGATTCTGGGTGAGATAATAAGCGAGAGGAAGGAGAAGAGATTAGCGGAGAAGGATTTGCTGGGCCATCTTCTAAACTCAAAAGGCGAAAAGGGTCAGGCTTTGACTAATGATCAGATTGCTGATAACATAATTGGAGTATTGTTTGCTGCTCAGGACACAACAGCTAGTGTTATTACATGGATTCTTAAGTACCTTAACGATGATCGAAAACTTTTCGAGGCCGTTAAGGCAGAGCATATAGAAATATATGAAGCAAATGATAGAGGAAAGAAGCACTTGACTTGGACTCAGATCAAACACATGCCTCTCACTTATAGAGTTGTGTTAGAGAGCTTAAGGATGGCAAGCGTTATTTCTTTCACTTTTAGGGAGGCAGTGGTTGATGTTGAATATCAAGGATACCTGATACCAAAGGGTTGGAAAGTGATGCCTTTATTCAGGAATATTCATCATAACCCAGATTTTTTCTCTGATCCTCATCATTTTGATCCCTCTAGATTTGAGGTAGCTCCGAAGCCCAATACATTTATGCCATTTGGCAATGGTGTTCATGCTTGTCCTGGAAATGAGCTGGCCAAACTAGAGATTCTCGTCTTAATCCACCACCTTGTTACCAAATTCAGGTGGGAGGTAGAGGGATCTCATAGTGGGATCCAGTACGGCCCATTTCCAGTGCCTCAACATGGGCTTCCCGCCACATTTTGGAAAGAGCCCAATACTACTACTCCCTCTTCTTAA 1314 43.0 MGFPFIGQTLQLYSQDPNFFFSSKQKKYGEIFKSHILGCPCVMVASPEAARFVLVTHAHLFKPTYPKCKETLIGPSAIFFHQGNYHSLIRKLVQNSLSLDRIWKRIPDIEAIADSVLHSCAAAGQSVNTFLEMKKFSFDVGILAIFGELDGNCKKKLKENYCILNKGYNSFPTNIPGTAYSKALLARKGLSEILGEIISERKEKRLAEKDLLGHLLNSKGEKGQALTNDQIADNIIGVLFAAQDTTASVITWILKYLNDDRKLFEAVKAEHIEIYEANDRGKKHLTWTQIKHMPLTYRVVLESLRMASVISFTFREAVVDVEYQGYLIPKGWKVMPLFRNIHHNPDFFSDPHHFDPSRFEVAPKPNTFMPFGNGVHACPGNELAKLEILVLIHHLVTKFRWEVEGSHSGIQYGPFPVPQHGLPATFWKEPNTTTPSS 437
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 9977254 9979415 + Conep08aG0116500.1 Cone8ag1134 443683
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1134 437 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone8ag1134 437 Pfam Cytochrome P450 3 405 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 FunFam Abscisic acid 8 1 428 - -
Cone8ag1134 437 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 CDD CYP90-like 25 423 - -
Cone8ag1134 437 Gene3D Cytochrome P450 1 428 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PANTHER CYTOCHROME P450 26 1 408 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone8ag1134 437 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone8ag1134 437 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag1134 Cone-Chr8:9977254 Cone9ag0347 Cone-Chr9:1528409 9.36E-189 dispersed
Cone12ag1091 Cone-Chr12:8915820 Cone8ag1134 Cone-Chr8:9977254 7.04E-303 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1134 K09843 - vvi:100246968 685.256