Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1199 ATGGATGGTTCTTTCACGACATGTAATGGGAACGGTCCGGCTAATGCTAATAACGGCCACTCACTTGTAAGGCACTCTCTTCCTCAATCGTTATTACCTTGGCTTGATTTAAGAGTCATTTATGTTAGATTTAGTAAATGTGAGATGGACAATGCTACCCCTGAAAACCTTACGATAAACCACATTCCGCTCGATTCCGAAACCCTTCTTGAAATCAATGGAGTAAGATCTAACGTCTATTCCAATGGGGTATCAACCTTGCTTAGAAGAGATAGGTTGGATAGGAAATCAGAAGAAGCAACCTTTGTGGGCACTGATAATATAAGAACTACAGGAAGGGTAAAGTTTGTGGTTTTTGATAAGGATCTTCTTGTTTTGTCCGGGGTTTTAGAAACATGTAATAATCATAGTAATGGTTTTGTCAATGGATTAAACGATCATGCGCCTCATGGCCCAAGATGGAGCATCAATTGTGAATCGAATATGTCCGTTGGGTCTGGATTTTTGAAGGGAAAGCAAGTTTTCGATCCCCATTTTGGTCCTGCTGCTCCTACACTCGATGTTTATATAGCAGGGTCATTTTCATCTAATCCGATTATCGTGACGAGGACAATACAGCTCAATGCTCTGAAAAAACATGTTACAAAGGGGATGTTGGATTCCATACCAGAGTCAAAGGAATCAGCAACTTCCGTTCCTTACTTTTCCAAGCTCCATTTGCAGCAGATGGAAGATGTTCTGAGCTCTAAACCAGAGAATAACAGATACAATGATATGTATTTAATGAGGTCAGAGTATTCAGAAGGCGAAGAAGACAAAGAGCTTTCATGGTTCACAGCTGGCATAAGGGTTGGTGTCCGGATTGGTCTTAGCATTTGTGTTGGACTTGGAATTGGCGTTGGGGAAACTAACTTGGAGATGTTAACTTTGATGCTGTTTCTGGTATATCTCTACTCCCATTGTGCAATAATGCCCGTGTCTCGTTCGTTCTGA 993 41.19 MDGSFTTCNGNGPANANNGHSLVRHSLPQSLLPWLDLRVIYVRFSKCEMDNATPENLTINHIPLDSETLLEINGVRSNVYSNGVSTLLRRDRLDRKSEEATFVGTDNIRTTGRVKFVVFDKDLLVLSGVLETCNNHSNGFVNGLNDHAPHGPRWSINCESNMSVGSGFLKGKQVFDPHFGPAAPTLDVYIAGSFSSNPIIVTRTIQLNALKKHVTKGMLDSIPESKESATSVPYFSKLHLQQMEDVLSSKPENNRYNDMYLMRSEYSEGEEDKELSWFTAGIRVGVRIGLSICVGLGIGVGETNLEMLTLMLFLVYLYSHCAIMPVSRSF 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10211443 10212615 - Conep08aG0123400.1 Cone8ag1199 443748

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1199 330 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 32 309 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1199 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1170 Cone-Chr10:8514707 Cone8ag1199 Cone-Chr8:10211443 1.09E-61 wgd
Cone17ag1337 Cone-Chr17:9393129 Cone8ag1199 Cone-Chr8:10211443 9.43E-68 wgd
Cone20ag0142 Cone-Chr20:642664 Cone8ag1199 Cone-Chr8:10211443 2.11E-69 wgd
Cone4ag1909 Cone-Chr4:13574131 Cone8ag1199 Cone-Chr8:10211443 3.94E-71 wgd
Cone7ag1823 Cone-Chr7:11879278 Cone8ag1199 Cone-Chr8:10211443 1.07E-70 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g589 Blo02g00954 . Bda06g00942 Bda08g01289 . . Bma05g00463 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag1199 . Cone10ag1170 . . . . . . . . . Bpe05g00497 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0054140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1