Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1216 ATGGAGATAGAAAAGAAGAAACCGAAAAACCTTCTATCCTTTTCTCTTCTTCTTTCTTCTTCTTCCTCACCATGCACGACATCTTCTTCACTGGCTATCGTCCTGCTCCTCTTTACTTTCCTTATCCACAGCCCGATTCCCGCCTTGTCCGCGACTTCAGCCGGCCCCTTCGTTCCGAAAGATAACTACCTGATCGCCTGTGGGGCCAAGGACACCCCCACCCTTCCAGACGGAAGAATCTTTAAAACCGACGAACAAGCCAATGCCTTACTAGACTCCCAAGAGGAAATCAAAGTCTCGGCCCAATTACTATCCAATGCAACATCACCTATCTACTCCGCGGCTCGGGTCTTCACCCAAGAAGCCACCTACGCGTTCCATCTAGCTGAGCCAGGATGGCATTGGGTCCGGCTTCACTTTTTCCCAATAAAAAACAACGATCATGATCTCACGAAGGCAAAGTTTAGCGTCACAACCGATAAGTATGTTCTCCTACACACCTTTAATATGGAAAATGACACAGAGGTTGTTGTCAAGGAATTCATCCTAAACACGACCGATCCAAAACTGTCAATTAAGTTTAGTCCGATTAAGGATTCAAGTGCTTTTATCAATGCCATTGAAGTCGTTTCGGCTCCGGATAAATTGATCTCGGACTCTGGCACTCTCATTGCACCAGCTAGCGACATGGATGGGCTTTCAACACGGGCCTTCGAGACCGTTTATCGGGTCAACATGGGGGGCCCGTTGATCACATCACAAAATGATTCTCTCGGGCGAACGTGGGTCCCTGATAAGCCTTATATGAAGAACGAGAATCTTGGTAAAACAAAATCGGTACAAACTAGCACCATTAAGTATCAAGAAGGAGAAGAACAAGTCGGAGCATTGATCGGGCCACAAAGTGTGTATGCAACCGCTGTTCAAATGGCAGATGCCGAAGTAGGCCAGCCCAACTTCAATGTGACGTGGAACTTCAAGGCCGAACCATTATACGACTACCTAGTCCGGTTCCATTTTTGTGACATTGTGAGCAAAGTGCTAAATGTGCTTTACTTCAATGTGTATGTCAATGAAAGAGCAGCGATTACCAATTTGGACTTGTCACACCTTTTGGGAGGACTAGGAATTGCATACTACAAAGACATTGTAGTCAATGCCTCCATGATTTCAGACATTCTCAATGTTCAAATCGGTTCGGCCAAGAAGGATAGCGGAGATATCAATGCCATTTTGAATGGGATTGAGATCATGAAAATAAGCAATTCAGTTAATAGTCTAGATGGGGAATTTGGAGTAGACGGAAAAGCAGAGTCTAATTCATCGAATAAGGGCACGGTGGCGGCAGTTGGGTTTGGTTTGATGTTCGGGGCTTTTGTAGGGCTTGGAGCAATGGTGTATAGGTGGAGAAAGAGGCCCCAAGATTGGCAAAAGAGCAAGAGCTTCTCTTCTTGGCTACTTCCGGTTCATGCCAGTGATACGAGCTTCATGAATAGTAAGACCTCAACCGGTGGCCACTACTCGTCATCCCTAGGCCTCGGTCGGTTGTTCACTTTTGCGCAATTACAAGAAGCCACAAAGAACTTTGACTCAAACGCGATTATTGGAGTTGGAGGATTTGGAAATGTGTATATTGGTGAGATCGATGAGGGGACTAAAGTTGCCGTGAAGCGTGGAAACCCGCAATCCGAACAAGGTATAACGGAATTCCAAACGGAGATTCAAATGCTTTCTAAGCTTAGACACCGACATTTGGTTTCGCTTATCGGGTATTGCGACGAAAACTCAGAAATGATCTTGGTTTACGAGTTCATGTCCAACGGGCCTTTCAGGGATCACCTATACGGCAAGGACTTAGCCCCGTTATCGTGGAAACAAAGGCTCGAGATCTGCATTGGAGCAGCCCGTGGGCTTCATTACCTTCACACCGGGACAGCCCAAGGTATCATTCACCGCGATGTTAAGACAACTAACATCTTGTTAGACAATCAATTCACGGCTAAGGTTGCTGATTTCGGGTTGTCAAAGGATGCACCAATGGGGCAAAACCACGTAAGCACAGCTGTAAAGGGTAGTTTCGGGTATTTAGACCCGGAATATTTCCGGAGACAACAATTGACTGACAAGTCCGATGTGTATTCATTCGGAGTTGTTTTGCTCGAGGCATTATGTGCACGGCCTGCAATCAACCCGGCATTGCCTAGAGAACAAGTGAACTTAGCTGATTGGGCTATGCAGTGGAAGAGAAAGGGGTTGCTCGATAAGATCATAGACCCGCTTCTAGTGGGCACAATCAATCTCGAGTCCATGAAGAAATTTGCCGAGGCTGCTGAGAAATGTTTGGCCGACCATGGGGTTGATAGGCCCACGATGGGAGATGTGTTATGGAACTTAGAATATGCTTTGCAGCTTCAAGAGTCTTTCTCACAAGAAAAGGCCAAGGAGGAAAATAAACCTTCGGACCCATCAAGCCTTGTTCCAGTGGCTACTGCCGAGGTTACACCGACCGGTCCATTGGTGCTGGAAAGCCGAGCTGTCACTCCGCCATTGGTGGAGGAGAATAGAAGTGGTGATGGTTCGAATGATATTCCGTCTATTGATCACTCGGGGACTGCTATGTTTGCACAATTTTCTAATCTAAATGGTAGGTAA 2652 46.49 MEIEKKKPKNLLSFSLLLSSSSSPCTTSSSLAIVLLLFTFLIHSPIPALSATSAGPFVPKDNYLIACGAKDTPTLPDGRIFKTDEQANALLDSQEEIKVSAQLLSNATSPIYSAARVFTQEATYAFHLAEPGWHWVRLHFFPIKNNDHDLTKAKFSVTTDKYVLLHTFNMENDTEVVVKEFILNTTDPKLSIKFSPIKDSSAFINAIEVVSAPDKLISDSGTLIAPASDMDGLSTRAFETVYRVNMGGPLITSQNDSLGRTWVPDKPYMKNENLGKTKSVQTSTIKYQEGEEQVGALIGPQSVYATAVQMADAEVGQPNFNVTWNFKAEPLYDYLVRFHFCDIVSKVLNVLYFNVYVNERAAITNLDLSHLLGGLGIAYYKDIVVNASMISDILNVQIGSAKKDSGDINAILNGIEIMKISNSVNSLDGEFGVDGKAESNSSNKGTVAAVGFGLMFGAFVGLGAMVYRWRKRPQDWQKSKSFSSWLLPVHASDTSFMNSKTSTGGHYSSSLGLGRLFTFAQLQEATKNFDSNAIIGVGGFGNVYIGEIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDLAPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDNQFTAKVADFGLSKDAPMGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPALPREQVNLADWAMQWKRKGLLDKIIDPLLVGTINLESMKKFAEAAEKCLADHGVDRPTMGDVLWNLEYALQLQESFSQEKAKEENKPSDPSSLVPVATAEVTPTGPLVLESRAVTPPLVEENRSGDGSNDIPSIDHSGTAMFAQFSNLNGR 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10306930 10309581 + Conep08aG0125300.1 Cone8ag1216 443765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1216 883 Pfam Malectin-like domain 65 420 IPR024788 -
Cone8ag1216 883 MobiDBLite consensus disorder prediction 837 868 - -
Cone8ag1216 883 FunFam receptor-like protein kinase FERONIA 492 604 - -
Cone8ag1216 883 FunFam Receptor-like protein kinase FERONIA 237 422 - -
Cone8ag1216 883 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524(InterPro)
Cone8ag1216 883 ProSiteProfiles Protein kinase domain profile. 529 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1216 883 Gene3D Transferase(Phosphotransferase) domain 1 605 824 - -
Cone8ag1216 883 SMART serkin_6 529 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1216 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1216 883 Pfam Protein tyrosine and serine/threonine kinase 533 724 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1216 883 Gene3D - 62 213 - -
Cone8ag1216 883 Gene3D - 237 422 - -
Cone8ag1216 883 CDD STKc_IRAK 535 799 - -
Cone8ag1216 883 FunFam Putative receptor-like protein kinase 62 213 - -
Cone8ag1216 883 PANTHER OS07G0166700 PROTEIN 518 806 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone8ag1216 883 SUPERFAMILY Protein kinase-like (PK-like) 513 796 IPR011009 -
Cone8ag1216 883 FunFam Receptor-like protein kinase FERONIA 605 818 - -
Cone8ag1216 883 Gene3D Phosphorylase Kinase; domain 1 495 604 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0058 Cone-Chr19:370210 Cone8ag1216 Cone-Chr8:10306930 6.05E-303 dispersed
Cone6ag0119 Cone-Chr6:572346 Cone8ag1216 Cone-Chr8:10306930 6.64E-273 dispersed
Cone8ag1216 Cone-Chr8:10306930 Cone9ag0144 Cone-Chr9:624888 6.74E-273 dispersed
Cone10ag0989 Cone-Chr10:6688146 Cone8ag1216 Cone-Chr8:10306930 3.50E-38 wgd
Cone10ag1113 Cone-Chr10:7929352 Cone8ag1216 Cone-Chr8:10306930 0 wgd
Cone12ag1168 Cone-Chr12:9274822 Cone8ag1216 Cone-Chr8:10306930 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83133 PF06426 SATase_N 2.70E-37 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1216 - - - 0.0