Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1278 ATGGCTCCTTTTCTCTCGAATTTGCTTTCCATCTTCTTCTTCTTGTTCCTCTTACCGCTAAGTCTGGCCCTTTCCACCGATCAGACGGCGCAGACCTTCATTTTCCGAGTTGACAGCCACTCCAAGCCCTCCATTTTCCCCTCCCATTACCACTGGTACTCTTCTGAATTCGCCGACCCTCTACAAATCCTTCACGTATACGACACCGTCTTCCATGGCTTCTCCGCAACTTTAAACCCGGTGCAAGTGGCCTCTATCCGACAACACCCTTCCGTCCTCGCCGTGTTCGAAGACAGCCGCCGTCAGCTCCACACCACACGCTCGCCTCAATTCCTCGGACTCCAGACCCAGCACGGACTCTGGTCCAAATCCGACTACGGCTCCGACGTAATAATCGGAGTCTTCGACACCGGAATCTGGCCGGAGCGACGGAGCTTCAGCGACTCGCACCTCGGTCCAGTTCCTGCAAGGTGGAAAGGAGTTTGTCAAACCGGAGTGAAATTCACATCCCGTAGCTGTAACCGCAAAATCGTCGGAGCCAGATTCTTCTCCAAAGGCCACGACGCTTCAATCAGTGTTGGCGGTCCCGTAATCGGAGCCAACGACACAGTTGAATACCGGTCACCTAGAGACGCAGACGGGCATGGGACCCACACCGCATCAACAGCAGCGGGAAGGTATGCTTACCAGGCAAGCATGGAAGGCTACGCTGCCGGAATCGCGAAAGGAGTCGCTCCTAAAGCTCGTTTGGCGGTTTACAAAGTTTGTTGGAAGAATTCAGGCTGTTTCGACTCTGATATTCTCGCCGCATTTGACGCGGCAGTCAATGACGGTGTTGACGTTATATCAATTTCAATTGGCGGCGGGGACGGTATCTCATCACCTTACTATCTCGACCCTATTGCGATAGGAGCATACGGCGCCGTTTCGAGAGGAGTTTTTGTCTCATCCTCAGCTGGAAACGACGGACCTAGTGGGATGTCTGTTACCAACTTATCGCCGTGGATCACGACGGTTGGATCGGGGACGATCGACCGGAACTTTCCGGCGGTTGTGATTCTCGGAAATGGAAGGAAGCTTTCCGGCGTGTCGTTGTACGCAGGAGCACCGTTGAGTGGGAAAATGTACCCTCTGGTTTATCCTGGAAAATCAGGGATTCTCTCTGCGTCACTGTGTATGGAAAATTCGCTCGATCCGAATCTGGTTCGAGGTAAGATCGTGATCTGCGATCGTGGAAGTAGTGCAAGAGTGGCTAAAGGTTTGGTTGTTAAGCAAGCTGGAGGGGTAGGAATGATTCTTGCAAACGGAATTTCAACTGGAGAAGGACTCGTCGGAGATGCTCACCTCCTTCCTGCCTGTGCTGTTGGCTCAGACGAAGGCGATGCCGCCAAAGCTTACATCACATCCTCTGCAAATCCAACGGCCACAATTGAATTTGAGGGCACCGTAATCGGAATCAAGCCTGCACCAATTGTCGCTTCATTTTCCGGTCGAGGACCAAACGGTTTGAATCCTGAAATTCTCAAACCGGATTTGATTGCTCCAGGTGTGAACATACTCGCCGCTTGGACCGATGCTGTGGGTCCTACTGGCTTACAGTCCGATAAGCGAAAAACAGAGTTCAGTATTCTGTCCGGCACATCCATGGCGTGTCCTCACGTCAGTGGAGCAGCAGCTTTGTTGAAATCTGCTCATCCAGATTGGAGTCCGGCTGCATTGAGATCTGCGATGATGACATCGGCGACCGTAACTGACAACCGACAGCAGCCGATGACCGAGGAGTCCTCTGGGAAAGCTTGTACGCCATACGATTTCGGAGCTGGACATGTCAGCTTGGATCGAGCAATGGACCCTGGACTTGTTTACGACATTTCGAATAATGATTACATCAACTTCTTATGTGCGATCGGGTACGGGCCGAAGGTAATTCAAGTGATCACTCGAACTCCAGCGGTTTGTCCCGCGAAGAAGCCACTGCCTGAGAATTTGAATTATCCCTCCATAGTTGCCCTCTTCTCGAGCTCATCAAGTGGAGTTTCTAGCAAGTCGTTTATTAGAACTGTGACCAATGTGGGTGCGTCAAACTCGGTTTATCAGGTGAAAGTCGATGCGCCTAGAGGAGTGACGGTTAATGTGAAGCCGGCAAAGCTAGTGTTTACAAGTGCAGTGAAGAAGCAGAGCTTTATAGTCACAGTGACCGGAGACAGCCGGAACCTGGCTTTGGATGAATCAGGTGCCGTGTTCGGTTCTCTGGCTTGGGTGGATGGTAAACATATGGTTAGAAGCCCCATTGTGGTTACTCTACTAGATCCTTTATAA 2319 51.49 MAPFLSNLLSIFFFLFLLPLSLALSTDQTAQTFIFRVDSHSKPSIFPSHYHWYSSEFADPLQILHVYDTVFHGFSATLNPVQVASIRQHPSVLAVFEDSRRQLHTTRSPQFLGLQTQHGLWSKSDYGSDVIIGVFDTGIWPERRSFSDSHLGPVPARWKGVCQTGVKFTSRSCNRKIVGARFFSKGHDASISVGGPVIGANDTVEYRSPRDADGHGTHTASTAAGRYAYQASMEGYAAGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGAYGAVSRGVFVSSSAGNDGPSGMSVTNLSPWITTVGSGTIDRNFPAVVILGNGRKLSGVSLYAGAPLSGKMYPLVYPGKSGILSASLCMENSLDPNLVRGKIVICDRGSSARVAKGLVVKQAGGVGMILANGISTGEGLVGDAHLLPACAVGSDEGDAAKAYITSSANPTATIEFEGTVIGIKPAPIVASFSGRGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLQSDKRKTEFSILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTSATVTDNRQQPMTEESSGKACTPYDFGAGHVSLDRAMDPGLVYDISNNDYINFLCAIGYGPKVIQVITRTPAVCPAKKPLPENLNYPSIVALFSSSSSGVSSKSFIRTVTNVGASNSVYQVKVDAPRGVTVNVKPAKLVFTSAVKKQSFIVTVTGDSRNLALDESGAVFGSLAWVDGKHMVRSPIVVTLLDPL 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10541907 10544672 + Conep08aG0131600.1 Cone8ag1278 443827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1278 772 CDD Peptidases_S8_3 102 582 IPR034197 -
Cone8ag1278 772 SUPERFAMILY Protease propeptides/inhibitors 33 102 - -
Cone8ag1278 772 Gene3D - 345 484 - -
Cone8ag1278 772 ProSiteProfiles Serine proteases, subtilase domain profile. 111 616 - -
Cone8ag1278 772 FunFam subtilisin-like protease SBT1.5 345 484 - -
Cone8ag1278 772 Pfam Subtilase family 127 591 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone8ag1278 772 Gene3D Peptidase S8/S53 domain 129 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone8ag1278 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 104 IPR037045 -
Cone8ag1278 772 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Cone8ag1278 772 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cone8ag1278 772 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Cone8ag1278 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 765 IPR045051 -
Cone8ag1278 772 CDD PA_subtilisin_like 351 477 - -
Cone8ag1278 772 Pfam PA domain 376 462 IPR003137 -
Cone8ag1278 772 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Cone8ag1278 772 SUPERFAMILY Subtilisin-like 103 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone8ag1278 772 Gene3D - 633 769 - -
Cone8ag1278 772 Pfam Peptidase inhibitor I9 33 104 IPR010259 -
Cone8ag1278 772 FunFam Subtilisin-like protease SBT1.5 633 769 - -
Cone8ag1278 772 FunFam Subtilisin-like protease SBT1.5 129 358 - -
Cone8ag1278 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0039 Cone-Chr17:246918 Cone8ag1278 Cone-Chr8:10541907 5.78E-300 dispersed
Cone20ag1361 Cone-Chr20:8737502 Cone8ag1278 Cone-Chr8:10541907 1.20E-296 dispersed
Cone4ag1585 Cone-Chr4:12117612 Cone8ag1278 Cone-Chr8:10541907 3.69E-171 dispersed
Cone5ag0940 Cone-Chr5:4018278 Cone8ag1278 Cone-Chr8:10541907 5.04E-164 dispersed
Cone5ag1529 Cone-Chr5:10482723 Cone8ag1278 Cone-Chr8:10541907 7.68E-90 dispersed
Cone6ag1160 Cone-Chr6:8847021 Cone8ag1278 Cone-Chr8:10541907 1.62E-78 dispersed
Cone6ag1191 Cone-Chr6:9197336 Cone8ag1278 Cone-Chr8:10541907 4.24E-202 dispersed
Cone6ag1192 Cone-Chr6:9204633 Cone8ag1278 Cone-Chr8:10541907 6.66E-204 dispersed
Cone6ag1437 Cone-Chr6:11515594 Cone8ag1278 Cone-Chr8:10541907 6.49E-250 dispersed
Cone7ag0423 Cone-Chr7:1878325 Cone8ag1278 Cone-Chr8:10541907 1.16E-129 dispersed
Cone8ag1278 Cone-Chr8:10541907 Cone9ag1364 Cone-Chr9:10213372 5.81E-247 dispersed
Cone12ag1227 Cone-Chr12:9526803 Cone8ag1278 Cone-Chr8:10541907 0 wgd
Cone4ag1998 Cone-Chr4:13960673 Cone8ag1278 Cone-Chr8:10541907 8.88E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1278 - - - 0.0