Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1283 | ATGGACGACGGTGAGCTCGAGTGCTCGAACCAAGAACTGTTTTCGAGCCAAAACATGGTTGGTGAGCTTCTAAGCAGTAGCTCATTCAACGGTTTCCTGGACCTAGATGGACTTTTCAAGGAGGCTCCTCAAGCTTGTATTCACACACACACTTGCAATCCTCCGGGCCCAGACCACAAGCACACACACACCTGTTTTCATGCCCATATTGCCTCCACCCCGACCGAGGAAGATGAGGCTGCCAATGAGGCGGAATCAACCAAGAAGAAGAAAAAACGGCCATCAGGTAACAGGGATGCAGTTCGAAAATATCGGGAGAAGAAGAAGGCCCGGGCAGCATCATTAGAAGATGAGGTAGTGAGGTTGAGAGCTTTGAATCAGCAGCTGGTGAAGAAGTTGCAGGGTCAAGCTGCATTAGAGGCAGAGATTGCTAGGCTGAGGTGTTTGCTTGTGGATATTCGGGGAAGGATTGATGGGGAGATTGGGACTTTTCCGTATCAGAAATCCATCAATCCGAACTTGAACTCGTTGAATTTGATGAACAATATTGGTGGTCCTGGTATTGGCGCTTACATGATGAATCCATGTAATCTGCAGTGTGATGATCAGGTGTACTGCCACCAATTAGGAGGGGTTGATGGAAAAAATGGAGATGGTGGCACTGGAGTAGATGGGCAAGGAACTCGTGCTTGTGAATTTGAGAATAATTTTCAGTGTTCAGCAGGTCAGAACTTGAGTGGATCAAAGAAGTTTCCAGGCCGTTGA | 765 | 47.71 | MDDGELECSNQELFSSQNMVGELLSSSSFNGFLDLDGLFKEAPQACIHTHTCNPPGPDHKHTHTCFHAHIASTPTEEDEAANEAESTKKKKKRPSGNRDAVRKYREKKKARAASLEDEVVRLRALNQQLVKKLQGQAALEAEIARLRCLLVDIRGRIDGEIGTFPYQKSINPNLNSLNLMNNIGGPGIGAYMMNPCNLQCDDQVYCHQLGGVDGKNGDGGTGVDGQGTRACEFENNFQCSAGQNLSGSKKFPGR | 254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10565509 | 10567089 | + | Conep08aG0132100.1 | Cone8ag1283 | 443832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1283 | 254 | MobiDBLite | consensus disorder prediction | 93 | 108 | - | - | |
Cone8ag1283 | 254 | Coils | Coil | 105 | 132 | - | - | |
Cone8ag1283 | 254 | SMART | brlzneu | 85 | 152 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag1283 | 254 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 87 | 134 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag1283 | 254 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 1 | 178 | IPR031106 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER) | |
Cone8ag1283 | 254 | MobiDBLite | consensus disorder prediction | 72 | 109 | - | - | |
Cone8ag1283 | 254 | SUPERFAMILY | Leucine zipper domain | 89 | 135 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag1283 | 254 | Pfam | Basic region leucine zipper | 86 | 142 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone8ag1283 | 254 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
Cone8ag1283 | 254 | CDD | bZIP | 87 | 144 | - | - | |
Cone8ag1283 | 254 | Gene3D | - | 76 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1231 | Cone-Chr12:9551826 | Cone8ag1283 | Cone-Chr8:10565509 | 2.51E-159 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46724 | PF16884 | ADH_N_2 | 3.20E-23 | CL0296 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1283 | K25785 | - | csv:101208161 | 275.789 |