Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1291 | ATGTCGAAAGAAGTGGGCGAAGAAGGAGCCAGACACCATGGCAAGGACTATGTGGACCCACCACCGGCACCACTCCTCGACTTCGCTGAGCTCAAGCTCTGGTCCTTCTACAGAGCCCTCATCGCTGAGTTCATCGCCACCCTGCTCTTCCTCTACATCACCGTCGCCACCGTCATCGGAAACAACAAGCAGAAAGACGCCTGCGCCGGCGTCGGAATCCTGGGCATTGCATGGGCTTTTGGCGGCATGATCTTCGTCCTTGTCTACTGTACCGCCGGCATTTCCGGTGGTCATATCAACCCAGCCGTGACGTTCGGACTGTTCCTAGCGAGAAAAGTGTCGCTGATCCGCGCGGTCGCGTACATAGTGGCTCAGTCGCTGGGAGCCATCGCCGGCGTAGGGCTGGTCAAAGCTTTCATGAAGAGCGCATACAACGCGAACGGCGGTGGCGCGAATCTCATCTCTCCTGGCTACAACAAGGGCACTGCTCTAGGCGCTGAGATTATCGGAACCTTTGTTCTAGTCTACACCGTTTTCTCAGCTACTGACCCAAAGAGGAGCGCCCGTGACTCGCACGTGCCCGTCCTGGCCCCACTACCTATCGGCTTTGCCGTGTTCATCGTCCACTTGGCGACTATTCCGATCACAGGAACTGGTATTAACCCTGCTAGAAGCTTTGGTGCGGCTGTGATCTACAATAATGAGAAAGTTTGGGACGAGCACTGGATCTTCTGGGTCGGTCCGTTCGTCGGAGCGTTGGCCGCGGCGGCGTACCACCAGTATATTCTCAGAGCGGCAGCGATTAAGGCGTTGGGATCTTTCAGGAGCAACCCTAGCAACTAA | 843 | 56.47 | MSKEVGEEGARHHGKDYVDPPPAPLLDFAELKLWSFYRALIAEFIATLLFLYITVATVIGNNKQKDACAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYIVAQSLGAIAGVGLVKAFMKSAYNANGGGANLISPGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSFGAAVIYNNEKVWDEHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10585800 | 10587075 | + | Conep08aG0132900.1 | Cone8ag1291 | 443840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1291 | 280 | Gene3D | Glycerol uptake facilitator protein. | 23 | 280 | IPR023271 | - | |
Cone8ag1291 | 280 | FunFam | Probable aquaporin PIP1-2 | 23 | 278 | - | - | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 117 | 136 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 166 | 184 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 202 | 224 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 80 | 104 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 242 | 262 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 8 | 276 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Cone8ag1291 | 280 | Pfam | Major intrinsic protein | 30 | 259 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | NCBIfam | MIP family channel protein | 42 | 258 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1291 | 280 | SUPERFAMILY | Aquaporin-like | 30 | 264 | IPR023271 | - | |
Cone8ag1291 | 280 | ProSitePatterns | MIP family signature. | 98 | 106 | IPR022357 | - | |
Cone8ag1291 | 280 | CDD | MIP | 38 | 262 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0517 | Cone-Chr18:2534956 | Cone8ag1291 | Cone-Chr8:10585800 | 4.37E-155 | dispersed | |
Cone1ag0730 | Cone-Chr1:6731374 | Cone8ag1291 | Cone-Chr8:10585800 | 1.32E-158 | dispersed | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone8ag1291 | Cone-Chr8:10585800 | 3.84E-152 | dispersed | |
Cone5ag0337 | Cone-Chr5:1440129 | Cone8ag1291 | Cone-Chr8:10585800 | 1.33E-151 | dispersed | |
Cone5ag1231 | Cone-Chr5:5673499 | Cone8ag1291 | Cone-Chr8:10585800 | 4.84E-161 | dispersed | |
Cone6ag0785 | Cone-Chr6:4000558 | Cone8ag1291 | Cone-Chr8:10585800 | 2.87E-135 | dispersed | |
Cone8ag0296 | Cone-Chr8:1713588 | Cone8ag1291 | Cone-Chr8:10585800 | 3.60E-134 | dispersed | |
Cone8ag1255 | Cone-Chr8:10463476 | Cone8ag1291 | Cone-Chr8:10585800 | 5.27E-23 | dispersed | |
Cone12ag1237 | Cone-Chr12:9577496 | Cone8ag1291 | Cone-Chr8:10585800 | 8.14E-198 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1291 | K09872 | - | cit:102624436 | 510.375 |