Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1306 ATGGCTATCTGTACAAAGGTACATACTGTAGCCAGGAAGTTGCTATTAAAGTCCTTAAACCTGAAAACCGTAAGTTCTGATATACAGAGAGAATTTGCCCAGGAGGTCTTCATTATGAGGAATGTTCGACACAAAAATGTTGTGCAATTCATAGCGGCATGTACCACGGCCCCCTATAACCTGTATATTGTAACGGAATTTATGTCCGGTGGTAATGTGTACGACTATTTACATATGCAAAAAGGCGTCTTCAAGCTTCCAGTCTTGCTCAAGGTAGCAATTAATATCTCCAAGGGAATGAACTACTTGCACCAAAACAATATAATCCACAGAGATTTGAAGACTGCCGATCTTTTGATGGACGAAAATGATGTCGGTGATTTTGGAGTTGCAAGAGTGAAATCTCAGTCAGGAGTCATGACAGCAGAAACTGGGACGTATCGGTGGATGGCCCCTGAGGTTATAGAACACAAGCCCTATGATCACAGAGCGGATGTTTTTAGTTTTGGAGTCGTCCTGTGGGAGTTGATCGCTGGAAAGCTTCCTTATGACTACTTCACACCATTACAAGCCGTGGTTGGTGTGGTTCAGAAGGGTCTAAGGCCTGCTATCCCAACAAATACCCACTCAAAGCTTGTTGAGTTACTGGAGAGAGGCTGGGTGAAAGATCCAGCATCGAGACCTGATTTCACTGAAATAATAGACATCCTGCAGAAAGTTGCCAAAGAGGTCGGAGACAACGGAGGAGAGGAACGGCGCAAACACAGATTGTCTGGAAGCTTCCTGTCTAACTTCAGAAGTCAACACTAA 810 44.07 MAICTKVHTVARKLLLKSLNLKTVSSDIQREFAQEVFIMRNVRHKNVVQFIAACTTAPYNLYIVTEFMSGGNVYDYLHMQKGVFKLPVLLKVAINISKGMNYLHQNNIIHRDLKTADLLMDENDVGDFGVARVKSQSGVMTAETGTYRWMAPEVIEHKPYDHRADVFSFGVVLWELIAGKLPYDYFTPLQAVVGVVQKGLRPAIPTNTHSKLVELLERGWVKDPASRPDFTEIIDILQKVAKEVGDNGGEERRKHRLSGSFLSNFRSQH 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10645628 10647974 - Conep08aG0134400.1 Cone8ag1306 443855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1306 269 SUPERFAMILY Protein kinase-like (PK-like) 10 240 IPR011009 -
Cone8ag1306 269 Gene3D Transferase(Phosphotransferase) domain 1 73 260 - -
Cone8ag1306 269 CDD STKc_MAP3K-like 25 237 - -
Cone8ag1306 269 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 Gene3D Phosphorylase Kinase; domain 1 3 72 - -
Cone8ag1306 269 PRINTS Tyrosine kinase catalytic domain signature 164 186 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 PRINTS Tyrosine kinase catalytic domain signature 65 78 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 PRINTS Tyrosine kinase catalytic domain signature 102 120 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 PRINTS Tyrosine kinase catalytic domain signature 145 155 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 PRINTS Tyrosine kinase catalytic domain signature 208 230 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 Pfam Protein tyrosine and serine/threonine kinase 11 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1306 269 PANTHER SERINE-THREONINE PROTEIN KINASE 10 240 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone8ag1306 269 PIRSF ILK 7 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag1306 Cone-Chr8:10645628 Cone9ag1008 Cone-Chr9:5263645 4.82E-59 dispersed
Cone12ag1251 Cone-Chr12:9642935 Cone8ag1306 Cone-Chr8:10645628 1.40E-154 wgd
Cone12ag0844 Cone-Chr12:7624899 Cone8ag1306 Cone-Chr8:10645628 6.97E-120 wgd
Cone7ag1915 Cone-Chr7:12257561 Cone8ag1306 Cone-Chr8:10645628 1.28E-102 wgd
Cone8ag0877 Cone-Chr8:8624044 Cone8ag1306 Cone-Chr8:10645628 9.25E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83134 PF15346 ARGLU 5.50E-38 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1306 - - - 0.0