Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1336 | ATGGCTTCTGGGACAGATTACCCGCCTCTCTTATTCATCTTTGAAGCCAATTACCGGAAGAGAAATGTCATACACAACAGAAATGAAAAGCCGGACTCTCTTGAGAACCCAAAGCACATACACATAAGCAAACCTTCGAGGCAACTCTCAACAGTTTCGCACTACGTTAGCCCGGTTCAGTTAAATTCTACAATTGAATCGGAATTTGATATTGAGATGGTTACCGCAAAACCATCATCAGACTGTGACTCGAAATTTGAACCCGTTTTCCGATCGGGGAGTTGTTCTGAAATTGGGCCAAAGCCTTTTATGGAGGATGAGCATGTATGTATAGATAATCTTCTTGAGCATCTGGGTCCCACTGAACACTTCTCTTCTCCTGGCGCTTTCTATGGGGTATTTGATGGGCATGGTGGTGTAGATGCAGCTTCTTTTATTAGGCATAACATTTTGAGGTTTATAATCAAAGATACCCATTTCTCCGATTGTATGAAAGGGGCTATTAGAAGTGCTTTTCTGAAAGCCGATCAAGCATTTGAAGAAGTTTCTTCTCTAGATACTTCCTCTGGTACTACGGCACTAACTGCCCTTATTTGTGGAAGGAAAATGCTAATTGCCAATGTGGGGGACTGTAGAGCCGTGTTAGGGAAGAGAGGCAAGGCGATGGAGTTATCAAAGGACCACAAGCCAAACTGCAGTTCTGAAAGACTAAGGATTGAAAAACTAGGTGGTGTGGTATATGACGGTTACCTTAACGGGCGGTTATCAGTGTCACGGGCACTTGGAGATTGGCATATGAAAGGCCCAAAAGGCTCCTTCCCCTCCTCTTGTCCTTTAAGCGCTGAGCCTGAGGTCCAAGAGGTAGTGCTTGGCCCAGAAGACGAGTTCTTGATATTAGGTTGTGATGGGTTGTGGGATGTTATGAGCAGCCAGTTTGCAGTTACGATTGCTAGGAAGGAGTTGATGATTCATAACGATCCAGAGAGATGTGCTAGGGAGCTTGTTAGGGAGGCTATGAAGAGGAATTCGTGCGATAATTTGACGGTTATCGTCCTCTGTTTTTCTCCGGATCCTCCACCTCAGATTGGACAGTGA | 1095 | 44.84 | MASGTDYPPLLFIFEANYRKRNVIHNRNEKPDSLENPKHIHISKPSRQLSTVSHYVSPVQLNSTIESEFDIEMVTAKPSSDCDSKFEPVFRSGSCSEIGPKPFMEDEHVCIDNLLEHLGPTEHFSSPGAFYGVFDGHGGVDAASFIRHNILRFIIKDTHFSDCMKGAIRSAFLKADQAFEEVSSLDTSSGTTALTALICGRKMLIANVGDCRAVLGKRGKAMELSKDHKPNCSSERLRIEKLGGVVYDGYLNGRLSVSRALGDWHMKGPKGSFPSSCPLSAEPEVQEVVLGPEDEFLILGCDGLWDVMSSQFAVTIARKELMIHNDPERCARELVREAMKRNSCDNLTVIVLCFSPDPPPQIGQ | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10770928 | 10773666 | - | Conep08aG0137500.1 | Cone8ag1336 | 443885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1336 | 364 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169(InterPro) | |
Cone8ag1336 | 364 | Gene3D | - | 72 | 357 | IPR036457 | - | |
Cone8ag1336 | 364 | FunFam | Probable protein phosphatase 2C 22 | 75 | 357 | - | - | |
Cone8ag1336 | 364 | SUPERFAMILY | PP2C-like | 85 | 355 | IPR036457 | - | |
Cone8ag1336 | 364 | CDD | PP2Cc | 90 | 354 | IPR001932 | - | |
Cone8ag1336 | 364 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 354 | IPR001932 | - | |
Cone8ag1336 | 364 | PANTHER | PROTEIN PHOSPHATASE 2C | 76 | 354 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone8ag1336 | 364 | SMART | PP2C_4 | 81 | 352 | IPR001932 | - | |
Cone8ag1336 | 364 | Pfam | Protein phosphatase 2C | 98 | 346 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0704 | Cone-Chr15:3824156 | Cone8ag1336 | Cone-Chr8:10770928 | 7.36E-98 | dispersed | |
Cone8ag1336 | Cone-Chr8:10770928 | Cone9ag0849 | Cone-Chr9:4151370 | 1.01E-29 | dispersed | |
Cone12ag1295 | Cone-Chr12:9857607 | Cone8ag1336 | Cone-Chr8:10770928 | 1.62E-253 | wgd | |
Cone4ag2028 | Cone-Chr4:14086405 | Cone8ag1336 | Cone-Chr8:10770928 | 4.34E-23 | wgd | |
Cone7ag1942 | Cone-Chr7:12392172 | Cone8ag1336 | Cone-Chr8:10770928 | 7.63E-156 | wgd | |
Cone8ag0907 | Cone-Chr8:8797371 | Cone8ag1336 | Cone-Chr8:10770928 | 1.08E-150 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1336 | K14803 | - | mdm:103422184 | 530.406 |