Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1353 | ATGGATGAAAACAAGGGAACAATTAACGCCTTAATGGATAACGCTCATTCTCATATTGAGATGGGATCGTTAGAAAAACGATCAAACGAATTTGAGAATAAGATCGTAGCTACATTGGGATCAAATGAACCGAAAGAAAATACTTTTGAGGAGAATCTACAGAGATTTCCACTGGTCGAAGATTCACAGATTTTTTACTCTCAACATTTGAGTTATACTGTGATTAATAGCATCAAGATTGTAGTTTTTTCCTCCAAAATTAACTTACTCATGCCTTTCGGGCCTATTGCTATCATAGTTGCAAAAGTATCTAACCATGAGGGTTGGGTCTTCCTTCTAAGCTTACTGGGAATCATACCTTTGGCTGAGCGTCTCGGTTATGCTACGGAGCAGCTGGCTTGCTATACTGGAGCTACGGTTGGAGGACTTTTAAATGCTACTTTTGGAAACGCAACAGAACTCATAATTTCAATCTATGCACTGAGAAGTGGAATGTTACGTGTTATTCAACAGTCTTTGCTAGGCTCAATTTTGTCAAACATGTTACTTGTGCTTGGATGTGCTTTCTTTGCTGGCGGACTTGTATTTTCTAAGAAGGAACAGGCTACTGCTTCTGTGAATTCCGGATTGCTGTTGATGGCAGTTATGGGCCTTGCATTTCCAGCTGTCCTCCACTCTACCCATACAGAGTTGCATACAGGAAAGTCAGAGTTGGCTCTTTCAAGGTTTAGCAGCTGCATTATGCTTGTAGCATATGCTGGGTATCTTTTTTTCCAACTTAAAAGCGAAAGGAATCCATATGTACCGGTTAGCGAGGGAGATACTCAGATGGAAGAGAATTCTGAGGATGAGGAAGAACCTGAGATATCTAAGTGGGAATCAATAATTTGGCTGTCTATTTTAACTGTGTGGATTTCCGTCCTCTCAGAATACTTGGTGAACGCCATAGAGGGAGCGTCGGTAGCGATGAAAATACCAGTAGCGTTCATTAGTGTCATTCTTCTTCCTATTGTCGGGAATGCTGCCGAGCATGCAGGTGCTGTTATGTTTGCCATGAAAGATAAACTTGACATATCTGTGGGAGTGGCAATAGGATCCTCCACACAAATATCCATGTTTGGGATTCCATTTTGTGTGGTCATTGGGTGGATAATGGGACGTCCTTTGGACTTAAATTTTCAAATTTTCGAGACAGCCACACTCTTCATAACCGTTCTAGTAGTAGCCTTTATGCTGCAGGATGGAGCCTCTAATTACCTCAAAGGATTGATGCTCATTCTTTGCTACGTAATAGTTGCCGCAAGTTTCTTTGTACATGTTGATCCTACTTCAGTAGCGGATAAGACTACGAAATCCGGTAACTGA | 1365 | 41.32 | MDENKGTINALMDNAHSHIEMGSLEKRSNEFENKIVATLGSNEPKENTFEENLQRFPLVEDSQIFYSQHLSYTVINSIKIVVFSSKINLLMPFGPIAIIVAKVSNHEGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRSGMLRVIQQSLLGSILSNMLLVLGCAFFAGGLVFSKKEQATASVNSGLLLMAVMGLAFPAVLHSTHTELHTGKSELALSRFSSCIMLVAYAGYLFFQLKSERNPYVPVSEGDTQMEENSEDEEEPEISKWESIIWLSILTVWISVLSEYLVNAIEGASVAMKIPVAFISVILLPIVGNAAEHAGAVMFAMKDKLDISVGVAIGSSTQISMFGIPFCVVIGWIMGRPLDLNFQIFETATLFITVLVVAFMLQDGASNYLKGLMLILCYVIVAASFFVHVDPTSVADKTTKSGN | 454 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10849714 | 10853724 | - | Conep08aG0139200.1 | Cone8ag1353 | 443902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1353 | 454 | FunFam | Vacuolar cation/proton exchanger | 282 | 438 | - | - | |
Cone8ag1353 | 454 | FunFam | Vacuolar cation/proton exchanger | 138 | 273 | - | - | |
Cone8ag1353 | 454 | NCBIfam | calcium/proton exchanger | 91 | 437 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cone8ag1353 | 454 | Gene3D | - | 282 | 438 | IPR044880 | - | |
Cone8ag1353 | 454 | Gene3D | - | 137 | 271 | IPR044880 | - | |
Cone8ag1353 | 454 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 51 | 442 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cone8ag1353 | 454 | Pfam | Sodium/calcium exchanger protein | 109 | 260 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone8ag1353 | 454 | Pfam | Sodium/calcium exchanger protein | 294 | 436 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0475 | Cone-Chr11:2399847 | Cone8ag1353 | Cone-Chr8:10849714 | 1.03E-195 | dispersed | |
Cone20ag1377 | Cone-Chr20:8792808 | Cone8ag1353 | Cone-Chr8:10849714 | 3.18E-188 | dispersed | |
Cone3ag0420 | Cone-Chr3:2063062 | Cone8ag1353 | Cone-Chr8:10849714 | 1.39E-107 | dispersed | |
Cone8ag1353 | Cone-Chr8:10849714 | Cone17ag0026 | Cone-Chr17:185953 | 2.62E-188 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1353 | K07300 | - | csv:101215915 | 628.246 |