Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1387 | ATGGTTTCTTCAGGGAGCTGTGTGCAGCAGGAAATCGCTCCTAGTAAATTAGAGCAGGAACATAGATCTAATAATGGAAACCGTGCCTCTAAGGAGATTCCTAGTAATGAAGTAAATGTGTCACAATCAGATCAAAAAGGGAAGTCTCAAGCCATGGTCGTGGTACCTGAGAAAGCCGTGCAAGAGCCTAATGCTCTGCAATCAGGCCAGAAAGGAAACACTCCATCTAAAATACGGGAGAAAGTATCAGAGGATGGATATAACTGGCGAAAATATGGTCAAAAACTTGTCAAGGGGAATGAGTTTGTTAGGAGTTATTATAAATGCACTCATCCAAATTGCCAGGTGAAAAAGCAATTGGAATGCTCACATGAAGGGCAGATTACAGATACTATTTACTTCGGTCATCATGATCATCCTAAACATCAACTAGTTAACGTCCCAGTAGCTGTTGGATTTGTTGTGTCCATAGTTGATGAAAAACCAGATGAGCCTTCTTCAACTAGTGTTGAAGAAAAATCATCCATTGCAAATAACCAGACACCTCATAAAACTGAGCAAGTAGATGCCCACCCTCCACCACCAGCCATCGATGATGTCAAAGCTGAACCTTTACAATCGGTTAGGATTAGGGATGATATTGACCATTGTGATGCTTCAGACTCGAAACGGCAGAAGAAGGGATATCGGAATCCTGAAACTCAAGCAGATAAGCCAAATGTTGAACAGCATGTTGTTCAGACTCTCAGCGAGGTCGATTTTGTGAATGATGGATACCGCTGGCGCAAATATGGGCAGAAATTAGTGAAAGGAAATCTAAATCCTAGAAGTTACTATAGATGTTCGACTCCTGGATGTCCTGCTAAGAAGCACGTGGAGAGATCATCAAATGATCCAAAGCTTGTTATAACCATGTATGATGGACAACACGACCATGATATGCCTCCAGCCAGGACTGTCATGCACAACACAACTGGGCCAACCAGCACGACAGCCCATAGTAGTGGGGCCCAAACAAAATCGGATGATCAAAAGGATCAAACTGTTGTTCCTACTGCAGTTCCCAGTAGTAATTCGGGCCCTGATGGAGAAGTTAACGAACCGAATGTAGTGTCTACTGATATCAGGTTAGTAGTGTCTGATAATTCAGGTGCTGTGAATGGAAAAAGTGATAAGGTGAAGGCCGAGATAAGAGCCAAATCGGAGCGACAGCAATTGTGGTGCGATAGTAGTTCATGA | 1239 | 43.02 | MVSSGSCVQQEIAPSKLEQEHRSNNGNRASKEIPSNEVNVSQSDQKGKSQAMVVVPEKAVQEPNALQSGQKGNTPSKIREKVSEDGYNWRKYGQKLVKGNEFVRSYYKCTHPNCQVKKQLECSHEGQITDTIYFGHHDHPKHQLVNVPVAVGFVVSIVDEKPDEPSSTSVEEKSSIANNQTPHKTEQVDAHPPPPAIDDVKAEPLQSVRIRDDIDHCDASDSKRQKKGYRNPETQADKPNVEQHVVQTLSEVDFVNDGYRWRKYGQKLVKGNLNPRSYYRCSTPGCPAKKHVERSSNDPKLVITMYDGQHDHDMPPARTVMHNTTGPTSTTAHSSGAQTKSDDQKDQTVVPTAVPSSNSGPDGEVNEPNVVSTDIRLVVSDNSGAVNGKSDKVKAEIRAKSERQQLWCDSSS | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 10979428 | 10982790 | - | Conep08aG0142600.1 | Cone8ag1387 | 443936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1387 | 412 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 25 | 341 | IPR044810 | GO:0003700(InterPro) | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 169 | 186 | - | - | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 373 | 387 | - | - | |
Cone8ag1387 | 412 | FunFam | WRKY transcription factor | 73 | 143 | - | - | |
Cone8ag1387 | 412 | ProSiteProfiles | WRKY domain profile. | 78 | 142 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | Pfam | WRKY DNA -binding domain | 256 | 313 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | Pfam | WRKY DNA -binding domain | 84 | 140 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 309 | 412 | - | - | |
Cone8ag1387 | 412 | FunFam | WRKY transcription factor | 241 | 316 | - | - | |
Cone8ag1387 | 412 | SUPERFAMILY | WRKY DNA-binding domain | 247 | 315 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 28 | 49 | - | - | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 204 | 233 | - | - | |
Cone8ag1387 | 412 | SUPERFAMILY | WRKY DNA-binding domain | 80 | 141 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | SMART | WRKY_cls | 255 | 314 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | SMART | WRKY_cls | 83 | 141 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | ProSiteProfiles | WRKY domain profile. | 250 | 315 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 161 | 240 | - | - | |
Cone8ag1387 | 412 | Gene3D | WRKY domain | 240 | 316 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | Gene3D | WRKY domain | 71 | 142 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone8ag1387 | 412 | MobiDBLite | consensus disorder prediction | 321 | 366 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag1387 | Cone-Chr8:10979428 | Cone9ag0026 | Cone-Chr9:128238 | 1.15E-70 | dispersed | |
Cone12ag1330 | Cone-Chr12:10026135 | Cone8ag1387 | Cone-Chr8:10979428 | 8.56E-239 | wgd | |
Cone14ag1206 | Cone-Chr14:9812542 | Cone8ag1387 | Cone-Chr8:10979428 | 4.14E-63 | wgd | |
Cone15ag1223 | Cone-Chr15:9724224 | Cone8ag1387 | Cone-Chr8:10979428 | 7.15E-12 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46733 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1387 | K18834 | - | vvi:100256306 | 367.851 |