Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1416 ATGGCTCAATTGCCTCCTAAAATCCCAACAACCAATTGGCCGGACTTTTCTCACAAGAAATTTAAGTTTCCAGCTGCTGCCGCCACCCCGTCTTGGGTGGACGATTTTCTCAACTTCTCCTCTACAAAACGAGGGTCACACCGTCGCTCCGCCAGCGATTCCATGACCTTCGTCGACTCGCCTGCTAATAACGGCTCGTCTGTTAACAATCATGAATTCGATCGATTTGATGACGAACAGTTCATGTCCATGTTCGACGAAGATTTTCATCATCATAATAGTATCTTGGCCAATGCAGGTGGCACGGCAGGCCCCAGCGCATCGTCTTCGAACCCGTCTACACCGTCTGATCATAACAGCATTAATGATGATGATCAGAATGATGCGTCGGGCCAGGAAAAGAGAGTGAATGAACCTCATGATCACGAGGTAGAAAGCGAATGCAAATTCGAAACGCAGGAGTTGAACAATTCGACCATGTCTAACCTGTCTTCCGATCGGATAACCGACCCAAAACGGGTCAAGAGAATTCTGGCGAATCGACAGTCGGCACAGCGATCGAGGGTGAGGAAGCTGCAGTACATATCAGATCTCGAACGTAGTGTCACATCATTACAAGTTGAAGTGTCGGTTTTGTCGCCGAGAGTTGCGTTTCTAGATCATCAGCGCTTGCTTCTAAACGTCGACAACAGTGCTCTCAAGCAACGAATCGCCGCCCTCGCTCAAGAGAAGATCTTTAAAGACGCTCATCAAGAAGCATTGAAGAGAGAGATAGAAAGATTGAGGCAAGTTTATCACCAACAGAGTCTCAAGAAGATGGAAAACGTAGCGGCTACACCGCCACCGAGCGGCGCCGGTTCTAAGTCAACTCCGGCTGAACAAAAAGATCAGCAGCTTCTTAGTGTTTGA 909 48.18 MAQLPPKIPTTNWPDFSHKKFKFPAAAATPSWVDDFLNFSSTKRGSHRRSASDSMTFVDSPANNGSSVNNHEFDRFDDEQFMSMFDEDFHHHNSILANAGGTAGPSASSSNPSTPSDHNSINDDDQNDASGQEKRVNEPHDHEVESECKFETQELNNSTMSNLSSDRITDPKRVKRILANRQSAQRSRVRKLQYISDLERSVTSLQVEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQEKIFKDAHQEALKREIERLRQVYHQQSLKKMENVAATPPPSGAGSKSTPAEQKDQQLLSV 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11073062 11074384 + Conep08aG0145600.1 Cone8ag1416 443965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1416 302 Coils Coil 251 271 - -
Cone8ag1416 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 175 190 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 MobiDBLite consensus disorder prediction 99 120 - -
Cone8ag1416 302 SMART brlzneu 168 232 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 PANTHER BASIC LEUCINE ZIPPER 34 1 292 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Cone8ag1416 302 MobiDBLite consensus disorder prediction 282 302 - -
Cone8ag1416 302 MobiDBLite consensus disorder prediction 43 72 - -
Cone8ag1416 302 MobiDBLite consensus disorder prediction 43 70 - -
Cone8ag1416 302 SUPERFAMILY Leucine zipper domain 172 226 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 MobiDBLite consensus disorder prediction 96 146 - -
Cone8ag1416 302 CDD bZIP_plant_RF2 173 223 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 Gene3D - 171 270 - -
Cone8ag1416 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 170 222 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 Pfam bZIP transcription factor 172 215 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone8ag1416 302 MobiDBLite consensus disorder prediction 121 146 - -
Cone8ag1416 302 MobiDBLite consensus disorder prediction 271 302 - -
Cone8ag1416 302 FunFam Basic leucine zipper 61 171 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1040 Cone-Chr14:8779291 Cone8ag1416 Cone-Chr8:11073062 1.88E-52 dispersed
Cone15ag1029 Cone-Chr15:8550755 Cone8ag1416 Cone-Chr8:11073062 9.40E-54 dispersed
Cone3ag0919 Cone-Chr3:4719219 Cone8ag1416 Cone-Chr8:11073062 1.41E-13 dispersed
Cone5ag0411 Cone-Chr5:1749704 Cone8ag1416 Cone-Chr8:11073062 1.50E-08 dispersed
Cone6ag0180 Cone-Chr6:856491 Cone8ag1416 Cone-Chr8:11073062 4.52E-18 dispersed
Cone8ag1416 Cone-Chr8:11073062 Cone9ag0205 Cone-Chr9:871968 1.18E-45 dispersed
Cone12ag1360 Cone-Chr12:10123603 Cone8ag1416 Cone-Chr8:11073062 2.93E-142 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46737 PF01425 Amidase 2.50E-83 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1416 - - - 0.0