Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1424 ATGGCCAAGGGAAGTGGACTTCCCGTTGATTTAGATCCATCTGCCACCACCTTCTTTCTCCACAATCCTGTAGTCCTCAACTCTTTCCCAGAAAATCTCATTCATCACTACCCTAACAACCATCATATTATCAACACTCTTTTTTCTTCTTCTACTGCTGCTAATAACCCCGTTAATAATATTTTCATGATGGAGTCCAAGGTTTCCGGCGCCACCACCTCAGCCTCTCCTCCTCCGCAAGCTCCTACTCCTCTTCCTCCTTCTAAGACTTTCCAATTAATCCCGATCAACCTTATAAACTCTTCCTCCCATAACGATGATTTCGATGATCATCTTCAACCTTCGCCTTCCGATCATGGTCATCATAGACGGACTACCATAAGTGAGATGGACTTCTTCGCTTATGATAAGAAAACAGCATCCTCTTCCTCCCCTAACCTCGATATCGATTGCAAAGACTCCGACAACCGACAAGTCAACGTAAACACTGGTTTGAATCTTCTTACGACAAATACATGTAGTGATCAGTCGATGGTTGATGACGGAATATCATCGAACATCGTTGCAGATGAGAAGAGAGCTAGAGATAATGAGCTGACAGTTCTTAAAGCTGAGCTTGAGAGAATGAACACGGAGAATGAAGAATTAAAAGGAGTACTGAATCAGGTTACTAGAAATTACCAAGCCTTGCATCTACAGGTTGCGAATCTTATGCAAAAACAGAAGGCGGATCAAATTCATCATGATCCAACTATGAGCAATATTCTTGATTCAAATAGTGTTAATCCTGAAGAAGTGTCGGTAGTGGAGGACAAGAAAGGACAATTGGTGCCAAGAAAGTTTCTGGATCTTTCTGGTGATTTATATGCTGATACTAATACAATTGTTTGTGAGAATTCGAACGGTTCATCAGAAGGGAGGAGTCGCGAGAGATCGGGGTCGGACCTGGGAAATAATGTCAATAATGGAGGTGAGGTAGGTTCCAAAGGGATTATTTTTAATGATCAAAGTAATAAGAAGGAATTAGTAATTGGTCAGGAGCAATCATCTCAAAGATGGGTTGCTAATAAAGTTCCAAGCTTCAATTCTACTAAAGATCAAATGGACCAAACTGAGGCCACCATGCGAAAGGCTCGTGTTTCTGTTCGAGCTCGATCCGAGGCACAAAATATCACTGATGGATGTCAATGGAGAAAGTATGGCCAGAAAATGGCCAAAGGAAACCCATGCCCTCGCGCTTACTATCGATGCACTATGGCTGCCGGATGTCCAGTTCGTAAACAGGTACAAAGATGTGCAGAAGATAAAACAATTTTGATAACGACGTACGAAGGCAATCACAACCACCCACTGCCTCCAGCCGCTATGGCAATGGCATCGACAACCTCATCCGCCGCCAGAATGCTCTTGTCAGGATCAATGTCGAGTGCAGACGGACTAATCAAAGCGTCGAACAACAGTTTCATGACAAGAAGCACTCTCCTGCCGTGTTCTTCCACCATGGCCACCATCTCAGCCTCAGCTCCATTTCCCACTGTTACATTGGACCTCACTCAGAACCCTAATAACCCTTTACAAGCACTCCAAAAGAACTTACTTCAACAAAACCAATTCCAATCCCTCCAATTCCCAAACCCGCATCCAAACAATCCTCTTCCAACCTTCCCATCTACAAGCAACAGCTTGTTGCCTCAAATTTTTGGATCAAAAGTGATTGGTAGCGACACTTTGAATGCTGCTAGCGCGGCCATTGCGGCCGATCCAAACTTCACTGCTGCTCTTGCTGCAGCCATTTCTTCTATTATTGGTGGTGGCTCTCAATCTCATTCAATTATTAACAGCTTTACTAATAACATTAACAATGGCAACGTTAATAGTGATAGTAATGATAATAATGGAAATCTTGCAACAAGCGAGAGTAATGCTAATGTTACTACAAGCAACAGCAACAACAGTAATAGCAATAATAAAGTCAGCAATACAACTTTTTCCGCAAATTAG 2001 42.78 MAKGSGLPVDLDPSATTFFLHNPVVLNSFPENLIHHYPNNHHIINTLFSSSTAANNPVNNIFMMESKVSGATTSASPPPQAPTPLPPSKTFQLIPINLINSSSHNDDFDDHLQPSPSDHGHHRRTTISEMDFFAYDKKTASSSSPNLDIDCKDSDNRQVNVNTGLNLLTTNTCSDQSMVDDGISSNIVADEKRARDNELTVLKAELERMNTENEELKGVLNQVTRNYQALHLQVANLMQKQKADQIHHDPTMSNILDSNSVNPEEVSVVEDKKGQLVPRKFLDLSGDLYADTNTIVCENSNGSSEGRSRERSGSDLGNNVNNGGEVGSKGIIFNDQSNKKELVIGQEQSSQRWVANKVPSFNSTKDQMDQTEATMRKARVSVRARSEAQNITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLIKASNNSFMTRSTLLPCSSTMATISASAPFPTVTLDLTQNPNNPLQALQKNLLQQNQFQSLQFPNPHPNNPLPTFPSTSNSLLPQIFGSKVIGSDTLNAASAAIAADPNFTAALAAAISSIIGGGSQSHSIINSFTNNINNGNVNSDSNDNNGNLATSESNANVTTSNSNNSNSNNKVSNTTFSAN 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11102295 11104699 + Conep08aG0146400.1 Cone8ag1424 443973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1424 666 SUPERFAMILY WRKY DNA-binding domain 385 452 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone8ag1424 666 Coils Coil 192 240 - -
Cone8ag1424 666 Gene3D WRKY domain 376 453 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone8ag1424 666 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 177 607 IPR044810 GO:0003700(InterPro)
Cone8ag1424 666 MobiDBLite consensus disorder prediction 313 328 - -
Cone8ag1424 666 FunFam probable WRKY transcription factor 31 376 453 - -
Cone8ag1424 666 MobiDBLite consensus disorder prediction 623 666 - -
Cone8ag1424 666 SMART WRKY_cls 391 451 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone8ag1424 666 ProSiteProfiles WRKY domain profile. 386 452 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone8ag1424 666 Pfam WRKY DNA -binding domain 393 450 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone8ag1424 666 MobiDBLite consensus disorder prediction 296 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0014 Cone-Chr1:120101 Cone8ag1424 Cone-Chr8:11102295 1.01E-102 dispersed
Cone3ag0945 Cone-Chr3:4905876 Cone8ag1424 Cone-Chr8:11102295 4.27E-41 dispersed
Cone5ag1852 Cone-Chr5:12997959 Cone8ag1424 Cone-Chr8:11102295 4.90E-91 dispersed
Cone8ag1424 Cone-Chr8:11102295 Cone3ag0455 Cone-Chr3:2192890 2.31E-21 dispersed
Cone12ag1367 Cone-Chr12:10158602 Cone8ag1424 Cone-Chr8:11102295 3.18e-310 wgd
Cone3ag1328 Cone-Chr3:32232091 Cone8ag1424 Cone-Chr8:11102295 1.59E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46739 PF12796 Ank_2 3.20E-10 CL0465 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1424 - - - 0.0