Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1444 | ATGTCTGAACTCGACAATCAGATTCCATCTGCTTTTGACCCATTTGCCGATGCAAATGCTGAGGACTCAGGTGCTGGTTCAAAAGAATACGTCCATGTGCGTATACAGCAACGTAACGGAAGAAAAAGCCTGACCACTGTCCAGGGATTGAAGAAGGAGTATAGCTACAACAAGATTCTCAAGGACCTCAAAAAGGAATTCTGCTGTAATGGTACTGTTGTCCAAGACCCAGAGCTAGGCCAGGTCATACAACTTCAGGGAGACCAGAGAAAGAATGTTTCAACCTTCCTTGTGCAGGCCAGTATTGTAAAGAAGGAACATATCAAGATTCACGGATTCTGA | 342 | 44.44 | MSELDNQIPSAFDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQASIVKKEHIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11192286 | 11194086 | - | Conep08aG0148600.1 | Cone8ag1444 | 443993 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1444 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743(InterPro) | |
Cone8ag1444 | 113 | SUPERFAMILY | eIF1-like | 5 | 113 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone8ag1444 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | GO:0003723(PANTHER) | |
Cone8ag1444 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone8ag1444 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cone8ag1444 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743(InterPro) | |
Cone8ag1444 | 113 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cone8ag1444 | 113 | Gene3D | - | 1 | 113 | - | - | |
Cone8ag1444 | 113 | NCBIfam | translation initiation factor SUI1 | 7 | 113 | IPR005874 | GO:0003743(InterPro) | |
Cone8ag1444 | 113 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 113 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag1444 | Cone-Chr8:11192286 | Cone9ag0099 | Cone-Chr9:430680 | 1.68E-69 | dispersed | |
Cone12ag1386 | Cone-Chr12:10243169 | Cone8ag1444 | Cone-Chr8:11192286 | 6.08E-75 | wgd | |
Cone14ag1124 | Cone-Chr14:9356178 | Cone8ag1444 | Cone-Chr8:11192286 | 1.05E-68 | wgd | |
Cone15ag1143 | Cone-Chr15:9273928 | Cone8ag1444 | Cone-Chr8:11192286 | 1.05E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1444 | K03113 | - | gmx:100306129 | 219.55 |