Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1448 ATGGCAACTCCAAAGCTTATTTCACTCTTGTTTATGCAACTCATTCTTGCGCTTTGTGTCTCGAGCAGTGGTGCCGTTTCAAATCCATCTAAGAGCTTGGAAATCGGATTCTATAAACGAACTTGTCCGGATGCAGAGTCTATAGTGGATCAGGTCATATATGATTATGTTTCTCAAAATCCCGACCTTGCCGCCCCTTTGTTGAGATTGCACTTCCACGATTGCTTTGTTAGGGGATGTGATGCCTCAGTGCTGCTGAATTCGACATCAAACAACACAGCAGAGAAAGATGCAGCTCCTAACTCAAGTCTAGATGGGTTTGCTGTAATTGATGCTGTGAAGGCGGCTTTAGAAAGAAAGTGTCCTGATGTCGTTTCATGTGCGGATATCTTAGCCTTAGTGGCTCGAGATGTGGTTAAGACGATTGGAGGACCATTTTGGCCAGTTCCAACAGGAAGAAGAGACGGCACAATATCACGTGCATCAGAAGCCTTGGCCAACATGCCACCGGCAGATGGTGATATCACCCTACTCAAAGCAATATTTGCTTCAAAGGGTCTTAGTGTGAAGGACCTCGTTATCTTATCAGGAGCACACACAATAGGGAGATCTCATTGCACATCATTTTCAAACCGATTATACAATTTCACCGGCAAAGGAGACACAGACCCGAGCTTGGACAAAAACTACATCCCTTATTTGAAGAAAGCATGTAAGCCAGGCGACACTACAACAACTGTAGAGATGGACCCGGGAAGCTTCACAACTTTTGATAAGCATTATTATGTTCTTGTGGGTAAAAGAAGAGGTCTCTTTCATTCTGATGCCGCCCTTTTGAACGATCCCGAGACTAGATCTTATGTCGAACGACAGAACCAATATCCCGGATCCTCATTCGGTATTGATTTCGGTCCGTCAATGGTGAATATGGGCAAAGTTGAGCTTCTTACTGGTAAAGAGGGAGAAATCAGGAAGCATTGTGCTCTTGCTAACTAG 996 44.48 MATPKLISLLFMQLILALCVSSSGAVSNPSKSLEIGFYKRTCPDAESIVDQVIYDYVSQNPDLAAPLLRLHFHDCFVRGCDASVLLNSTSNNTAEKDAAPNSSLDGFAVIDAVKAALERKCPDVVSCADILALVARDVVKTIGGPFWPVPTGRRDGTISRASEALANMPPADGDITLLKAIFASKGLSVKDLVILSGAHTIGRSHCTSFSNRLYNFTGKGDTDPSLDKNYIPYLKKACKPGDTTTTVEMDPGSFTTFDKHYYVLVGKRRGLFHSDAALLNDPETRSYVERQNQYPGSSFGIDFGPSMVNMGKVELLTGKEGEIRKHCALAN 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11200470 11201772 + Conep08aG0149000.1 Cone8ag1448 443997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1448 331 ProSiteProfiles Plant heme peroxidase family profile. 32 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 Pfam Peroxidase 49 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 FunFam Peroxidase 36 178 - -
Cone8ag1448 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cone8ag1448 331 PANTHER PEROXIDASE 25-RELATED 22 327 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone8ag1448 331 SUPERFAMILY Heme-dependent peroxidases 33 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 FunFam Peroxidase 169 310 - -
Cone8ag1448 331 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601(InterPro)
Cone8ag1448 331 CDD secretory_peroxidase 33 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone8ag1448 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone8ag1448 331 Gene3D - 36 331 - -
Cone8ag1448 331 Gene3D Peroxidase, domain 2 169 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1389 Cone-Chr12:10249372 Cone8ag1448 Cone-Chr8:11200470 1.05E-149 dispersed
Cone15ag0797 Cone-Chr15:4884337 Cone8ag1448 Cone-Chr8:11200470 2.54E-98 dispersed
Cone17ag0388 Cone-Chr17:1850873 Cone8ag1448 Cone-Chr8:11200470 2.26E-77 dispersed
Cone20ag1028 Cone-Chr20:7177896 Cone8ag1448 Cone-Chr8:11200470 8.94E-81 dispersed
Cone5ag1379 Cone-Chr5:8424671 Cone8ag1448 Cone-Chr8:11200470 2.83E-82 dispersed
Cone5ag1767 Cone-Chr5:12566731 Cone8ag1448 Cone-Chr8:11200470 7.03E-134 dispersed
Cone8ag1448 Cone-Chr8:11200470 Cone19ag0477 Cone-Chr19:3919418 1.46E-74 dispersed
Cone8ag1447 Cone-Chr8:11197714 Cone8ag1448 Cone-Chr8:11200470 1.92E-81 tandem
Cone8ag1448 Cone-Chr8:11200470 Cone8ag1449 Cone-Chr8:11205720 3.96E-121 tandem
Cone6ag1090 Cone-Chr6:6646757 Cone8ag1448 Cone-Chr8:11200470 2.09E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1448 K00430 - cit:102616942 434.106