Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1455 ATGGACATCGATTCCGCTGGGAGATCCAATTGGCTCTATGACTACGGAATAGTCGATGACATCGCCGTTTCCGCCGGTAACTTTCAGCCTCCGGTCGCCGGATTCAACTGGTCTTCGCAGCCTATCAATTCCGCTCCTCACATCAGTGAGGAAGCAGATTACTCTCTAGGGGATGGAACAGATAACCTTAAGGATTCCGGATCAAGAAAACGTTCAAGGCCTGAACCGGCCTGTCCACCTGGTTCTAAAGCTTGCCGAGAGAAACTGAGAAGGGATAGACTTAATGAAAGGTTCCTTGAATTGAGCTCGATCTTAGAGCCGGAAAAGCCTCCCAGAACCGATAAGGCTATTATTTTGAGCGACGCTGTTCGTATGGTGACCCAATTACGAAGTGATATGCTCAAGCTAAAGGAAACGAACGAGAATTTGCAAGCCAAGATTAAAGAACTCAAGGCTGAGAAGATTGAGCTTCGAGATGAGAAGCAGAGGTTGAAGGCAGATAAAGAGAAGTTGGATCGGCAAGTCAAAGCCCTAAGTTCTCAACCGGACTTCCCAGCTCCTCCTCCTGCCATGTCAACTGCTTTTGCCGCACAAGCACAAACGGTTGGTAATAAGCTGATGCCTTTTATAGGCTACCCCAGCATTGCTATGTGGCAGTTCATGCCACCGGCTGCAGTTGACACGTCACAAGACCATGTGGTGCGCCCTCCGGTTGCTTAA 720 49.03 MDIDSAGRSNWLYDYGIVDDIAVSAGNFQPPVAGFNWSSQPINSAPHISEEADYSLGDGTDNLKDSGSRKRSRPEPACPPGSKACREKLRRDRLNERFLELSSILEPEKPPRTDKAIILSDAVRMVTQLRSDMLKLKETNENLQAKIKELKAEKIELRDEKQRLKADKEKLDRQVKALSSQPDFPAPPPAMSTAFAAQAQTVGNKLMPFIGYPSIAMWQFMPPAAVDTSQDHVVRPPVA 239
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 11228658 11230295 - Conep08aG0149700.1 Cone8ag1455 444004
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1455 239 Gene3D - 82 156 IPR036638 GO:0046983(InterPro)
Cone8ag1455 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 153 IPR036638 GO:0046983(InterPro)
Cone8ag1455 239 SMART finulus 84 135 IPR011598 GO:0046983(InterPro)
Cone8ag1455 239 Coils Coil 126 181 - -
Cone8ag1455 239 PANTHER BHLH TRANSCRIPTION FACTOR 9 239 IPR044818 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro)
Cone8ag1455 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 129 IPR011598 GO:0046983(InterPro)
Cone8ag1455 239 MobiDBLite consensus disorder prediction 52 84 - -
Cone8ag1455 239 Pfam Helix-loop-helix DNA-binding domain 83 130 IPR011598 GO:0046983(InterPro)
Cone8ag1455 239 CDD bHLH_AtILR3_like 83 158 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0319 Cone-Chr4:1448078 Cone8ag1455 Cone-Chr8:11228658 9.22E-30 dispersed
Cone7ag0314 Cone-Chr7:1366874 Cone8ag1455 Cone-Chr8:11228658 2.37E-30 dispersed
Cone8ag0851 Cone-Chr8:8463240 Cone8ag1455 Cone-Chr8:11228658 4.48E-07 dispersed
Cone8ag1264 Cone-Chr8:10483506 Cone8ag1455 Cone-Chr8:11228658 9.00E-10 dispersed
Cone1ag0107 Cone-Chr1:591227 Cone8ag1455 Cone-Chr8:11228658 3.50E-57 wgd
Cone12ag1399 Cone-Chr12:10289289 Cone8ag1455 Cone-Chr8:11228658 1.58E-118 wgd
Cone14ag1119 Cone-Chr14:9321339 Cone8ag1455 Cone-Chr8:11228658 1.61E-69 wgd
Cone15ag1137 Cone-Chr15:9236738 Cone8ag1455 Cone-Chr8:11228658 1.32E-73 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46743 PF00450 Peptidase_S10 4.20E-117 CL0028 Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1455 - - - 0.0