Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1455 | ATGGACATCGATTCCGCTGGGAGATCCAATTGGCTCTATGACTACGGAATAGTCGATGACATCGCCGTTTCCGCCGGTAACTTTCAGCCTCCGGTCGCCGGATTCAACTGGTCTTCGCAGCCTATCAATTCCGCTCCTCACATCAGTGAGGAAGCAGATTACTCTCTAGGGGATGGAACAGATAACCTTAAGGATTCCGGATCAAGAAAACGTTCAAGGCCTGAACCGGCCTGTCCACCTGGTTCTAAAGCTTGCCGAGAGAAACTGAGAAGGGATAGACTTAATGAAAGGTTCCTTGAATTGAGCTCGATCTTAGAGCCGGAAAAGCCTCCCAGAACCGATAAGGCTATTATTTTGAGCGACGCTGTTCGTATGGTGACCCAATTACGAAGTGATATGCTCAAGCTAAAGGAAACGAACGAGAATTTGCAAGCCAAGATTAAAGAACTCAAGGCTGAGAAGATTGAGCTTCGAGATGAGAAGCAGAGGTTGAAGGCAGATAAAGAGAAGTTGGATCGGCAAGTCAAAGCCCTAAGTTCTCAACCGGACTTCCCAGCTCCTCCTCCTGCCATGTCAACTGCTTTTGCCGCACAAGCACAAACGGTTGGTAATAAGCTGATGCCTTTTATAGGCTACCCCAGCATTGCTATGTGGCAGTTCATGCCACCGGCTGCAGTTGACACGTCACAAGACCATGTGGTGCGCCCTCCGGTTGCTTAA | 720 | 49.03 | MDIDSAGRSNWLYDYGIVDDIAVSAGNFQPPVAGFNWSSQPINSAPHISEEADYSLGDGTDNLKDSGSRKRSRPEPACPPGSKACREKLRRDRLNERFLELSSILEPEKPPRTDKAIILSDAVRMVTQLRSDMLKLKETNENLQAKIKELKAEKIELRDEKQRLKADKEKLDRQVKALSSQPDFPAPPPAMSTAFAAQAQTVGNKLMPFIGYPSIAMWQFMPPAAVDTSQDHVVRPPVA | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11228658 | 11230295 | - | Conep08aG0149700.1 | Cone8ag1455 | 444004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1455 | 239 | Gene3D | - | 82 | 156 | IPR036638 | GO:0046983(InterPro) | |
Cone8ag1455 | 239 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 84 | 153 | IPR036638 | GO:0046983(InterPro) | |
Cone8ag1455 | 239 | SMART | finulus | 84 | 135 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag1455 | 239 | Coils | Coil | 126 | 181 | - | - | |
Cone8ag1455 | 239 | PANTHER | BHLH TRANSCRIPTION FACTOR | 9 | 239 | IPR044818 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro) | |
Cone8ag1455 | 239 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 78 | 129 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag1455 | 239 | MobiDBLite | consensus disorder prediction | 52 | 84 | - | - | |
Cone8ag1455 | 239 | Pfam | Helix-loop-helix DNA-binding domain | 83 | 130 | IPR011598 | GO:0046983(InterPro) | |
Cone8ag1455 | 239 | CDD | bHLH_AtILR3_like | 83 | 158 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag0319 | Cone-Chr4:1448078 | Cone8ag1455 | Cone-Chr8:11228658 | 9.22E-30 | dispersed | |
Cone7ag0314 | Cone-Chr7:1366874 | Cone8ag1455 | Cone-Chr8:11228658 | 2.37E-30 | dispersed | |
Cone8ag0851 | Cone-Chr8:8463240 | Cone8ag1455 | Cone-Chr8:11228658 | 4.48E-07 | dispersed | |
Cone8ag1264 | Cone-Chr8:10483506 | Cone8ag1455 | Cone-Chr8:11228658 | 9.00E-10 | dispersed | |
Cone1ag0107 | Cone-Chr1:591227 | Cone8ag1455 | Cone-Chr8:11228658 | 3.50E-57 | wgd | |
Cone12ag1399 | Cone-Chr12:10289289 | Cone8ag1455 | Cone-Chr8:11228658 | 1.58E-118 | wgd | |
Cone14ag1119 | Cone-Chr14:9321339 | Cone8ag1455 | Cone-Chr8:11228658 | 1.61E-69 | wgd | |
Cone15ag1137 | Cone-Chr15:9236738 | Cone8ag1455 | Cone-Chr8:11228658 | 1.32E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46743 | PF00450 | Peptidase_S10 | 4.20E-117 | CL0028 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1455 | - | - | - | 0.0 |