Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1487 ATGGGGCGTAAGAGATCTGGTTTGAGGAAGAAGAATCTGGGGATCCACGCACAGTTTTTAGTGGGCTTCGTGTTGATCTGTGCTGTACAAGTTTCGCTTGGAATTACTAATCCCAATGACTTTACTGCCATTAGTAACTTGTATACTTCGTTGGGTTCCCCTGTTCTTCCTGGCTGGGGTATTGGACAAGACCCGTGTGGTGATAAGTGGCAAGGCGTTGAATGTAATAACTCAGATATAATAAGAATAGTTATTAATGCTGCTACTTTGGGAGGAGAGTTGGGCAATAGCTTGGGAATGTTCACTTCTATCAAAGGAATAGACCTGAGCAACAATAACATTGGGGGAAGTATTCCATCAAACTTGCCTGTTACAATGCAAAACCTTTTTCTTTCAGCTAATCAATTTACCGGAAGCATCCCAAGTTCCTTATCATCTTTGACTCAGCTAGCAGCCATGTCACTGAATGACAATCACTTAAGTGGAGAAATACCAGATTCTTTTGCAGCTCTTACAGGATTGGTCAATTTGGACTTATCCAGCAACAATTTTAGTGGTCCACTGCCTTCCTCTCTACAAGATTTGCTGGTTTTGACCACTCTGCGTTTGCAGAATAATCAGCTTTCGGGGACCCTTGACGTTTTACAGGATCTTCCATTGAAAGACTTGAATGTAGAGAATAATCTCTTCTCTGGACCCATACCCGATAAGTTGCTGAATATCCCAACTTTTAGAAAGGATGGAAACCCATGGAATTCTACTGTCTCTCCAGCGTCTCCACCTTCACCCTCATCAAAACCTTCACCAGCAGGTCCATCGCAGTCATTTTTTCCAACACCACCTTCTGGGAAGTCACCCGCTAAACAGTCTGATGGACCATCTGCCTCAAAGGAATCAAATGCTGGAAAAAAGGGTAATTCTACCAAAAGGGTAGTTTGGATATCAATTGCAGGAGTCTTGTCATTTATTATTTTGGCTCTAGCACTTGTGCTTTTTATGCCAAGGTGTATGAAACGGAGCAGAATGGCCTACACAATTTCCAAGCGGCATCAAATAGGTGCTTACAGGGGTGACAGAGAGAGTCCCAGGCACAGTCCCTTGGTCCAGCCAACCAGTGAAACACATAAAGATCCAATTCCTAAGGAGGCAGTTCCGGTGCCAAAGGAGGAACGTCAAACAGAGACTCAAAGATGGGGGGTGATACAAAAGCCACAGAAAGAGAACGAGAGAGATACACAAAGAATGGGCATAAGACGAAAACAAGATGATCATGAGATAGACATTAGTGCACATGATGTTTATCTGATGCCTCCTCCACCTCCTTCTCCTCTGCCACCTCCACCACCCCCACCTCCTCCTCCTCCACCGCCTCCTGTTCAGAAGGTCATTGTTGAACCTATTGTTCCAGCTGAAGTTTCTCCTGTAAGGCCTACTAGCAGAGCTATCAATACCCCTACTTTTGCGAAGTCCTTCACCATTGCTTCCCTTCAGCAATATACAAATAGCTTTTCACAAGAGAATCTCATTGGAGTCGGAATGCTGGGCAGTGTTTATAGGGCCCAACTTCCTGATGGAAAGCTGCTTGCAGTGAAGAAACTGGACAAAAGAGCTTCCAGTGTGCAGAAGAACAACGAATTCCTTGAACTAGTGAACGATATTGATAAAATCCGACATGCAAATGTGGTTGAGCTTGTGGGCTATTGTGCAGAGCATGATCAAAGGCTTCTGATTTACGAGTACTGCATTAATGGAACTCTACAGGACGCTCTGCATTCAGATGATGAATTCAAAAAGAAACTCTCTTGGAATGCCCGTGTTCGAATGGCCCTTGGGGCTGCTAGAGCATTAGAGTACTTGCATGAGGTCTGTCATCCACTTGTCGTACACAGGAACTTCAAGTCTGCAAATGTTCTTCTTGGTGATGAACTCTCTGTGCATGTCTCTGATTGTGGTTTGGCTCCATTGATATCATCTGGTTCTGTTAGTCAGTTATCAGGGCATCTACTATCTATGTATGGCTATGGGGCTCCAGAGTTTGAATCGGGCATCTATACACTTCAAAGTGACGTTTATAGCTTTGGAGTTGTCATGTTAGAGCTTTTGACCGGCCGCATGTCCTATGACAAGGCAAAGAGTAGATCAGAGCAATTTCTGGTGAGATGGGCAATCCCACAGCTTCATGACATTGATGCATTATCAAGAATGGTTGATCCTTCTCTCAATGGTCAATACCCTGCAAAATCCTTGTCGCACTTCGCCGATATTATATCTCGATGTGTCCAGCGGGAGCCTGAATTCAGGCCACCCATGTCAGAAGTTGTACAGGACTTGTACGACATGATAAGGAGAGAGCCGCGTGGCAGCGGATCAATCGAAGATTGA 2382 44.63 MGRKRSGLRKKNLGIHAQFLVGFVLICAVQVSLGITNPNDFTAISNLYTSLGSPVLPGWGIGQDPCGDKWQGVECNNSDIIRIVINAATLGGELGNSLGMFTSIKGIDLSNNNIGGSIPSNLPVTMQNLFLSANQFTGSIPSSLSSLTQLAAMSLNDNHLSGEIPDSFAALTGLVNLDLSSNNFSGPLPSSLQDLLVLTTLRLQNNQLSGTLDVLQDLPLKDLNVENNLFSGPIPDKLLNIPTFRKDGNPWNSTVSPASPPSPSSKPSPAGPSQSFFPTPPSGKSPAKQSDGPSASKESNAGKKGNSTKRVVWISIAGVLSFIILALALVLFMPRCMKRSRMAYTISKRHQIGAYRGDRESPRHSPLVQPTSETHKDPIPKEAVPVPKEERQTETQRWGVIQKPQKENERDTQRMGIRRKQDDHEIDISAHDVYLMPPPPPSPLPPPPPPPPPPPPPPVQKVIVEPIVPAEVSPVRPTSRAINTPTFAKSFTIASLQQYTNSFSQENLIGVGMLGSVYRAQLPDGKLLAVKKLDKRASSVQKNNEFLELVNDIDKIRHANVVELVGYCAEHDQRLLIYEYCINGTLQDALHSDDEFKKKLSWNARVRMALGAARALEYLHEVCHPLVVHRNFKSANVLLGDELSVHVSDCGLAPLISSGSVSQLSGHLLSMYGYGAPEFESGIYTLQSDVYSFGVVMLELLTGRMSYDKAKSRSEQFLVRWAIPQLHDIDALSRMVDPSLNGQYPAKSLSHFADIISRCVQREPEFRPPMSEVVQDLYDMIRREPRGSGSIED 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11333661 11338559 + Conep08aG0152900.1 Cone8ag1487 444036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1487 793 Pfam Leucine Rich Repeat 174 195 IPR001611 GO:0005515(InterPro)
Cone8ag1487 793 Pfam Leucine Rich Repeat 104 122 IPR001611 GO:0005515(InterPro)
Cone8ag1487 793 Pfam Leucine Rich Repeat 127 147 IPR001611 GO:0005515(InterPro)
Cone8ag1487 793 SUPERFAMILY Protein kinase-like (PK-like) 477 778 IPR011009 -
Cone8ag1487 793 SUPERFAMILY L domain-like 56 243 - -
Cone8ag1487 793 Gene3D Ribonuclease Inhibitor 37 255 IPR032675 -
Cone8ag1487 793 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 470 580 - -
Cone8ag1487 793 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 198 782 IPR046959 -
Cone8ag1487 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 581 789 - -
Cone8ag1487 793 ProSiteProfiles Protein kinase domain profile. 503 781 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1487 793 MobiDBLite consensus disorder prediction 250 307 - -
Cone8ag1487 793 Gene3D Transferase(Phosphotransferase) domain 1 582 785 - -
Cone8ag1487 793 MobiDBLite consensus disorder prediction 256 276 - -
Cone8ag1487 793 MobiDBLite consensus disorder prediction 356 398 - -
Cone8ag1487 793 MobiDBLite consensus disorder prediction 277 306 - -
Cone8ag1487 793 MobiDBLite consensus disorder prediction 434 458 - -
Cone8ag1487 793 Gene3D Phosphorylase Kinase; domain 1 473 580 - -
Cone8ag1487 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 263 - -
Cone8ag1487 793 Pfam Protein tyrosine and serine/threonine kinase 506 777 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1487 793 MobiDBLite consensus disorder prediction 375 396 - -
Cone8ag1487 793 SUPERFAMILY Formin homology 2 domain (FH2 domain) 447 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1064 Cone-Chr6:6225237 Cone8ag1487 Cone-Chr8:11333661 3.08E-181 dispersed
Cone8ag1487 Cone-Chr8:11333661 Cone9ag1056 Cone-Chr9:5752906 2.10E-179 dispersed
Cone12ag1436 Cone-Chr12:10403858 Cone8ag1487 Cone-Chr8:11333661 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83141 PF02201 SWIB 5.00E-29 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1487 - - - 0.0