Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag1508 | ATGGAAAATCCTCTGCTGAGAGGAGAAAGTAGCGGGAATTTCAACGTCCGGAGCCGAGATCAGAGGTTGAGGTTCAAACGCCGTTCCGACGCCATCACTTATGGCTCTTCGTATCAAAGAGCAGCCGCGCTCGTCGATCTGGCTGAAGATGGTGTGGGTATACCAGAGCAAATTCTTGATGATTCAAGCTTTCACAGTGCTGCCAAGTTCTACTTCGTGTTCATAAAATTTGATTTCATTTGGTCCCTCACTTATTTCGCACTCATAGCCCTAAACTTCTTTGAGAAACCATTATGGTGCTCCAACTCTACGAATTCCACTTATACTTGCGATGATGATAGAGACTACTACTATCTCGGGCAGCTGCCGTATCTAACTACTGCTGAATCTCTTATTTACGAGGGGATAACTCTCGTATTAGTCCTGATTCATACCTTCTTTCCAATTTCATATGAAGGGCTCACTCTCTACTGGAAAATTCCCCTACATAAGTTAAAGGTCATTTGCATCGGAATTTTGGTTGCTGATTTAGTTGTGTATGCTCTCTATCTATCGCCAGTGGCCTTTGATTATCTTCCATTCAGAATTGCACCTTATATCAGAGTTGTCCTTTTCATCATAGCAATTAGGGATTTACGAGAGAGCATCGTTATCTTAGCTGGAATGCTTCCCACATACTTGAATATCTTGGCTTTGGGGCTTTTATTTCTTCTCTTTTCCAGCTGGGTAGCATATGTCATGTTTGAAGACACCGCCCAAGGAACAACAGTATTTACTTCTTTTGGAACCACCTTATACCAAATGTTTGTCTTATTCACTACATCTAATAATCCAGATGTTTGGATACCTGCTTACAAGGTCTCTCGTTGGTACTGCTTATTTTTTGTTCTATATGTGCTGTTGGGGGTTTACTTTGTCACAAACTTGATCCTTGCCGTTGTATATGACAGTTTTAAAAGTCAGCTTGTAAAACAAGTATGTGAGAAGGACTGCAAGAGGAAAGCTATATTGGAGAAAGCATTTCGTATTATTGATAAAGACAATGTTGGATTTCTTGATGAAGAGCAATGCATTCAACTATTTGAGGAACTGAACAAATATAGAACTCTGCCTAAAATATCAAGGGAAGATTTCCATTCGATATTTAAGGAGCTGGATGACAGTGGTGATTTCAAAATAAATGTGGATGAGTTTGCTGACCTTTGCAATGCCATAGCTTTGAAGTTTCAGAAGGAGGATACTCCATCTTGTTTCGAAAGGTTTCCATCATTCTACCATTCACCATTGTCTGAAAAGTTGAAAGCTGTTGTTCGGGGCCCGACATTTGGATACGTAATATCCTCCATTCTCATTCTGAATCTGGTTGCTGTCATTGTTGAAACAACTCTCGATATAGAAAACAATTCCGGTCAAAAGACATGGCAAGTGGTGGAGTTTGTCTTTGGTTGGATATATGTAATCGAAATGGCTTTAAAAGTCTATTCACTTGGTTTTGAGAATTACTGGAGAGATGGTCAAAATCAGTTTGATTTCCTAGTTACATTGGTAATAGCTATTGGAGAAACTATGACGTTTGCTGCCCCAAATGGATTTACTTTTCTTTCAAATGGAGAGTGGATTCGTTACCTTCTTCTTGCAAGATTGCTGCGCTTGATAAGGCTCCTTATGCATGTCAAGAGTTACCGAGCATTTGTTGCCACATTTATTACCCTAATACCGAGTCTGATGCCATATCTTGGGACCATTTTCTGTATACTCTGTATATATTGCTCCCTTGGTGTTCAGATCTTTGGAGGGATTGTGAATGCTGGAAATTCTGCTTTGGATGACACAGATCTTGCAGACGATGATTATTTACTTTTCAACTTCAATGACTACCCAAATGGGATGGTGACACTTTTCAATTTGCTAGTTATGGGAAGTTGGCAAGTCTGGATGCAGAGCTACAAGGAATTGACGGGAACTTCTTGGAGCCTCATCTATTTTGTCAGCTTCTACTTAATAACAGTTTTGCTGCTTTTGAATTTGGTTGTCGCTTTTGTCTTGGAGGCATTCTTTGCTGAATTGGAGATCGAATCGTCAGAGAAATGTGATGAACCAGACAAGGAAGAGGGAAGCGAAAAGGATCGCCGACGATTTGTTGGGACAAAAACAAGAAGCCAAAGAGTTGATGTTCTTCTCCATCATATCCTAAGCGCAGAGTTGAACCAAAATCAGTCTAGCAGTACATAA | 2232 | 40.19 | MENPLLRGESSGNFNVRSRDQRLRFKRRSDAITYGSSYQRAAALVDLAEDGVGIPEQILDDSSFHSAAKFYFVFIKFDFIWSLTYFALIALNFFEKPLWCSNSTNSTYTCDDDRDYYYLGQLPYLTTAESLIYEGITLVLVLIHTFFPISYEGLTLYWKIPLHKLKVICIGILVADLVVYALYLSPVAFDYLPFRIAPYIRVVLFIIAIRDLRESIVILAGMLPTYLNILALGLLFLLFSSWVAYVMFEDTAQGTTVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKVSRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLVKQVCEKDCKRKAILEKAFRIIDKDNVGFLDEEQCIQLFEELNKYRTLPKISREDFHSIFKELDDSGDFKINVDEFADLCNAIALKFQKEDTPSCFERFPSFYHSPLSEKLKAVVRGPTFGYVISSILILNLVAVIVETTLDIENNSGQKTWQVVEFVFGWIYVIEMALKVYSLGFENYWRDGQNQFDFLVTLVIAIGETMTFAAPNGFTFLSNGEWIRYLLLARLLRLIRLLMHVKSYRAFVATFITLIPSLMPYLGTIFCILCIYCSLGVQIFGGIVNAGNSALDDTDLADDDYLLFNFNDYPNGMVTLFNLLVMGSWQVWMQSYKELTGTSWSLIYFVSFYLITVLLLLNLVVAFVLEAFFAELEIESSEKCDEPDKEEGSEKDRRRFVGTKTRSQRVDVLLHHILSAELNQNQSSST | 743 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 11410186 | 11414871 | + | Conep08aG0155500.1 | Cone8ag1508 | 444057 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag1508 | 743 | FunFam | Two pore calcium channel protein 1 | 565 | 722 | - | - | |
| Cone8ag1508 | 743 | SUPERFAMILY | Voltage-gated potassium channels | 440 | 685 | - | - | |
| Cone8ag1508 | 743 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 373 | 408 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 332 | 367 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | Pfam | Ion transport protein | 136 | 321 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone8ag1508 | 743 | Pfam | Ion transport protein | 441 | 685 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone8ag1508 | 743 | Gene3D | - | 565 | 724 | - | - | |
| Cone8ag1508 | 743 | FunFam | Two pore calcium channel protein 1 | 211 | 322 | - | - | |
| Cone8ag1508 | 743 | Gene3D | - | 211 | 318 | - | - | |
| Cone8ag1508 | 743 | FunFam | Two pore calcium channel protein 1 | 432 | 564 | - | - | |
| Cone8ag1508 | 743 | Pfam | EF-hand domain pair | 337 | 401 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | Gene3D | - | 431 | 564 | IPR027359 | - | |
| Cone8ag1508 | 743 | CDD | EFh | 337 | 401 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | MobiDBLite | consensus disorder prediction | 696 | 715 | - | - | |
| Cone8ag1508 | 743 | PANTHER | TWO PORE CALCIUM CHANNEL PROTEIN 1 | 1 | 740 | IPR044581 | GO:0000325(PANTHER)|GO:0005245(InterPro)|GO:0005245(PANTHER)|GO:0005774(PANTHER)|GO:0006816(PANTHER) | |
| Cone8ag1508 | 743 | SMART | efh_1 | 377 | 405 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | SMART | efh_1 | 336 | 364 | IPR002048 | GO:0005509(InterPro) | |
| Cone8ag1508 | 743 | SUPERFAMILY | EF-hand | 329 | 402 | IPR011992 | - | |
| Cone8ag1508 | 743 | Gene3D | - | 319 | 403 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag1508 | K16900 | - | cit:102609722 | 1084.71 |