Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone8ag1517 | ATGGCAGATGGATCGCAGTATCCTTCAGTGTTTCAGAAGATGAACGGGCAGTCTTACCTCATTTCTAAGCTTTCCTCTAACTTCTACAGCAGGAATTATGCAGTTACTAGTGCATCTGTTAATGGAGATCTGCATAGTCGTCTACATCCAGCATGCCAAGGCACTGGCTTGGCAGCCATATCACATCTTTCTCCAATTTCTGTACAAGCTCCGTCTGAAAAAGGTGCAGCTGGTTTTCTAATAGATTTTCTCATGGGAGGAGTCTCTGCTGCTGTGTCTAAAACAGCAGCTGCTCCCATCGAGCGTATCAAACTACTGATACAAAATCAGGATGAGATGATCAAGACTGGTCGGCTTTCTGAGCCATACAAGGGAATTTCTGACTGTTTTGCACGAACCATGAAGGATGAAGGCGTCATTGCTCTTTGGAGGGGAAACACTGCCAATGTTATCAGATACTTCCCCACTCAGGCTTTGAACTTTGCATTCAAGGATTATTTTAAAAGGCTGTTCAATTTTAAGAAAGACAAAGATGGGTACTGGAAGTGGTTTGCTGGTAACTTGGCATCCGGTGGAGCTGCTGGTGCCTCGTCTCTTCTATTTGTTTATTCATTGGACTACGCCCGTACACGACTTGCTAATGATTCTAAAGCTGCTAAAAAGGGTGGTGAGAGGCAGTTCAATGGATTAATCGATGTTTACAAGAAAACCATTCAATCTGATGGTATTGCGGGGCTATATCGTGGATTTAACATCTCGTGCATTGGGATTATTGTGTATCGTGGACTTTACTTTGGGATGTACGATTCCCTTAAACCAGTTGTTCTGGTTGGTGATTTGCAGGATAGTTTCTTCGCTAGTTTCTTACTCGGTTGGGGCATAACCATAGGAGCTGGATTGGCTTCTTACCCCATTGATACAGTTCGTAGAAGGATGATGATGACCTCAGGAGAAGCTGTAAAGTACAAGAGCTCCTTGGATGCATTTAATCAAATCGTCAAGAAGGAAGGTACAAAGTCTCTCTTCAAGGGTGCTGGGGCAAACATTCTGCGTGCTGTTGCTGGTGCCGGTGTGCTTGCTGGTTATGATAAGCTGCAGCTCATTGTTTTCGGCAAGAAATATGGATCTGGTGGTGGTTAA | 1140 | 44.12 | MADGSQYPSVFQKMNGQSYLISKLSSNFYSRNYAVTSASVNGDLHSRLHPACQGTGLAAISHLSPISVQAPSEKGAAGFLIDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKTGRLSEPYKGISDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLIDVYKKTIQSDGIAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLVGDLQDSFFASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQIVKKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGG | 379 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 11444879 | 11447106 | - | Conep08aG0156600.1 | Cone8ag1517 | 444066 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 95 | 109 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 145 | 165 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 291 | 313 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 82 | 95 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 247 | 265 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Mitochondrial carrier protein signature | 197 | 215 | IPR002067 | GO:0055085(InterPro) | |
| Cone8ag1517 | 379 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 74 | 376 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Adenine nucleotide translocator signature | 123 | 144 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Adenine nucleotide translocator signature | 156 | 168 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Adenine nucleotide translocator signature | 79 | 91 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Adenine nucleotide translocator signature | 287 | 303 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | PRINTS | Adenine nucleotide translocator signature | 182 | 195 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cone8ag1517 | 379 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 282 | 368 | IPR018108 | - | |
| Cone8ag1517 | 379 | Pfam | Mitochondrial carrier protein | 182 | 274 | IPR018108 | - | |
| Cone8ag1517 | 379 | Pfam | Mitochondrial carrier protein | 282 | 370 | IPR018108 | - | |
| Cone8ag1517 | 379 | Pfam | Mitochondrial carrier protein | 78 | 174 | IPR018108 | - | |
| Cone8ag1517 | 379 | FunFam | ADP,ATP carrier protein, mitochondrial | 80 | 375 | - | - | |
| Cone8ag1517 | 379 | SUPERFAMILY | Mitochondrial carrier | 78 | 364 | IPR023395 | - | |
| Cone8ag1517 | 379 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 182 | 274 | IPR018108 | - | |
| Cone8ag1517 | 379 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 77 | 170 | IPR018108 | - | |
| Cone8ag1517 | 379 | Gene3D | Mitochondrial carrier domain | 80 | 375 | IPR023395 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag1357 | Cone-Chr10:10578109 | Cone8ag1517 | Cone-Chr8:11444879 | 3.80E-239 | dispersed | |
| Cone11ag1238 | Cone-Chr11:9278307 | Cone8ag1517 | Cone-Chr8:11444879 | 2.68E-208 | dispersed | |
| Cone18ag0355 | Cone-Chr18:1720121 | Cone8ag1517 | Cone-Chr8:11444879 | 8.31E-210 | dispersed | |
| Cone20ag0273 | Cone-Chr20:1212621 | Cone8ag1517 | Cone-Chr8:11444879 | 5.39E-66 | dispersed | |
| Cone8ag1517 | Cone-Chr8:11444879 | Cone9ag0836 | Cone-Chr9:4096979 | 4.91E-25 | dispersed | |
| Cone16ag0225 | Cone-Chr16:1653918 | Cone8ag1517 | Cone-Chr8:11444879 | 4.10E-137 | transposed | |
| Cone10ag1356 | Cone-Chr10:10575099 | Cone8ag1517 | Cone-Chr8:11444879 | 1.59E-247 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone8ag1517 | K05863 | - | rcu:8269156 | 642.499 |