Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1520 ATGAAGCGATACGTGTACATCAATGATGATGAGTTATCACATGATTTCTACTGTGATAACCGCATTTCTAATAGAAAATATACTCTGCTGAACTTCCTTCCAAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAGTATTTTTTGTTGATTGCTTGTCTTCAACTATGGTCCTTAATTACTCCAGTAAATCCTGCAAGTACATGGGGTCCACTTATCTTTATTTTTGCGGTCTCTGCAACCAAAGAGGCATGGGATGATTACAACAGATATCTATCAGATAAGAAAGCAAATGAGAAAGAAGTTTGGGTTGTCAAGAAGGGTTCTAAAAAGCTAATCCAGGCACAAGATATGCATGTAGGTGATATCGTGTGGCTCAGAGAGAATGATGAAGTGCCGTGTGATCTTGTTTTGATCGGCTCCTCTGATCCACAAGGACTTTGCTATATTGAGACATCTGCCCTTGATGGTGAAACAGATTTGAAGTCAAGGATCATACCCTCTGCTTGCATGGGAATAGATATTGAACTATTGCACAAAATCAAGGGTGTTATTGAATGTCCTAATCCAGATAAGGATATTAGGAGATTTGATGCAAATATCCGGTTATTTCCTCCATTTATTGACAATGACCTGTGCCCTTTAACCATAAAAAACACAATTCTCCAGTCATGTTATTTGCGCAACACAGACTGGGCATGTGGAGTTGCTGTTTACACAGGCAATGAAACAAAGCTGGGTATGAGCAGGGGGGTACCGGAGCCAAAACTTACAGCTGTGGATGCAATGATCGACAAGTTAACTGGAGCTATATTTGTCTTTCAAATTGTGGTTGTTATTGTTCTGGGTATAGCCGGAAATGTGTGGAAGGATACTGAGGCCAGAAAGCAATGGTACGTGCTGTATCCAAAGGAGGGTCCATGGTATGAGCTGTTGGTCATCCCGCTTCGGTTTGAGCTTCTCTGTTCAATCATGATTCCTATATCAATCAAGGTGTCTCTTGATCTAGTGAAGAGCTTGTATGCAAAGTTTATTGATTGGGACAATGAGATGATTGACCATGAAACTGGTATCCCATCCCATGCTACAAACACAGCAATAAGCGAAGACTTGGGACAAGTTGAGTACATATTGACAGACAAAACTGGTACTCTTACTGAAAACAAAATGATCTTCAGAAGATGTTGTATCGGTGGCATTTTCTATGGAAATGAGAGCGGGGATGCCTTGAAAGATCAAGAGCTGCTTGATGCCATTGCCAACAGCTCTCCAGAGGTTATACTTTTCCTTACTATTATGGCGATATGTAATACGGTTGTACCTATAAAGAGCAAACATGGAGATGTCTTATACAAGGCGCAGTCACAGGATGAGGATGCTCTTGTGCGTGCTGCTGCTAAATTGCACATGGTTTTTGCCAGTAAGAATGGAAATATCCTTGAGATTAGGTTCAATGGTTCAATATTTCAATATGAAATCCTGGAAACTCTAGAGTTCACTTCTGAAAGGAAAAGAATGTCAATAGTGGTGAAAGATTTTCAGAGTGGGAAGATTTTGCTTCTGTCAAAAGGAGCAGATGAAGCAATTCTTCCTCATGCACGTCCCGGAAAGCAAACTAGAGTATTTAATGAAGCTGTTGAGCAATATTCTCAATTGGGGCTACGTACGCTATGTTTGGCTTGGCGTGAATTAAAGGAAGATGAATATCAAGAATGGTCGTTGACATTTAAAGAAGCTAGTAGCACATTGGTTGATAGGGAGTGGAGACTAGCTGAGGTATGCCAAAGGTTAGAACACAATCTCGAAGTCCTTGGAGTTACTGCTATAGAAGATCGGTTGCAGGATGGTGTCCCAGAGACAATAGAGTCACTAAGAAAAGCAGGAATAAACTTTTGGATGCTGACAGGAGACAAGCAAAATACTGCCATCCAGATTGCTCTTTCTTGTAACTTCATTTCCCCAGAGCCGAAAGGTCAGCTTCTGCTAATTGATGGGAAAACTGGAGATGAAATTCGTAGGAGCTTGGAGAGTGTCTTACTCACAATGAAGATAACATCTGCAGAACCGAAGGATGTTGCTTTTGTTGTTGATGGTTGGGCCCTTGAAATTGCTCTCAAACACTATAAGAAGCCTTTCACTGAATTAGCAATATTGTCAAGGACTGCAATCTGTTGCCGTGTGACACCATCACAAAAGGCACAGCTTGTGGAACTCCTTAAATCATGTGACTATAGAACATTAGCTATTGGGGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGATATTGGTGTTGGCATTAGTGGCAGAGAAGGACTGCAGGCAGCAAGAGCAGCTGATTATAGTATTGGAAGGTTCAGATTTCTTAAGAGATTGGTTCTTGTCCATGGGAGATACTCGTACAACCGCACGGCATTTTTGTCCCAGTATTCCTTTTATAAATCCTTACTCATATGTTTCATCCAAATCTTTTTCTCTTTCATTTCAGGTGTCTCCGGAACCAGTCTCTTTAATTCTGTCAGCTTGATGGCTTATAATGTTTTCTACACGAGCATTCCTGTTCTAGTCAGTGTTCTTGACAAAGATCTTAATGAAGAAACAGTGATGCAGCATCCCCAAATTTTGTTTTACTGTCAAGCTGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTATACCATGCCATTGTTGTATTCATAATCACTATACACACTTATGCTAATGAGAAAAGTGAAATGGAGGAGCTTTCCATGGTGGCACTCTCTGGATGCATATGGTTACAAGCTTTTCTCGTAGCTTTAGAGACCAATTCATTTACTATATTGCAACACCTTGCCATATGGGGAAATTTAGCTGGGTTCTACATCCTCAACTGTATCCTCAGTGCCCTTCCATCATCTGGCATGTATACGATCATGTTCCGTTTATGTAGACAACCGTCTTACTGGATAACAATGCTTCTCATAGTGGCTGTGGGGTTGGGTCCAATTCTAGCTCTCAAGTACTTCAGGTATACATACAGACCAAGCAAAATCAACATACTTCAACAGGCCGAACGTCTAGGCGGTCCCATCATGTCTCTTGGAAACATAGAGCCACAACCAAGATCCGTAGAGAAAGACGTCTCGCCGTTGTCAATCACCCAACCCAAAAACAGAAATCCAGTATATGAGCCTCTATTATCGGACACACCGAATTCTACTAGAAGGTCATTCGGTCCTGGCACACCATTTGATTTCTTTCAATCCCAGTCTAGACTTTCTTCTTCAAGCTACTCCAGAAACTGCAAGGATAACTAG 3321 41.31 MKRYVYINDDELSHDFYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKKGSKKLIQAQDMHVGDIVWLRENDEVPCDLVLIGSSDPQGLCYIETSALDGETDLKSRIIPSACMGIDIELLHKIKGVIECPNPDKDIRRFDANIRLFPPFIDNDLCPLTIKNTILQSCYLRNTDWACGVAVYTGNETKLGMSRGVPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEARKQWYVLYPKEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNEMIDHETGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCIGGIFYGNESGDALKDQELLDAIANSSPEVILFLTIMAICNTVVPIKSKHGDVLYKAQSQDEDALVRAAAKLHMVFASKNGNILEIRFNGSIFQYEILETLEFTSERKRMSIVVKDFQSGKILLLSKGADEAILPHARPGKQTRVFNEAVEQYSQLGLRTLCLAWRELKEDEYQEWSLTFKEASSTLVDREWRLAEVCQRLEHNLEVLGVTAIEDRLQDGVPETIESLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLIDGKTGDEIRRSLESVLLTMKITSAEPKDVAFVVDGWALEIALKHYKKPFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGRFRFLKRLVLVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLNEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLYHAIVVFIITIHTYANEKSEMEELSMVALSGCIWLQAFLVALETNSFTILQHLAIWGNLAGFYILNCILSALPSSGMYTIMFRLCRQPSYWITMLLIVAVGLGPILALKYFRYTYRPSKINILQQAERLGGPIMSLGNIEPQPRSVEKDVSPLSITQPKNRNPVYEPLLSDTPNSTRRSFGPGTPFDFFQSQSRLSSSSYSRNCKDN 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11463080 11470651 - Conep08aG0156900.1 Cone8ag1520 444069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1520 1106 MobiDBLite consensus disorder prediction 1039 1106 - -
Cone8ag1520 1106 FunFam Phospholipid-transporting ATPase 75 251 - -
Cone8ag1520 1106 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Cone8ag1520 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Cone8ag1520 1106 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 571 IPR023299 GO:0000166(InterPro)
Cone8ag1520 1106 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Cone8ag1520 1106 Pfam haloacid dehalogenase-like hydrolase 594 764 - -
Cone8ag1520 1106 SFLD p-type atpase 362 801 IPR044492 -
Cone8ag1520 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1016 IPR023298 -
Cone8ag1520 1106 Gene3D - 75 251 - -
Cone8ag1520 1106 SUPERFAMILY HAD-like 374 805 IPR036412 -
Cone8ag1520 1106 FunFam Phospholipid-transporting ATPase 602 789 - -
Cone8ag1520 1106 SFLD Haloacid Dehalogenase 362 801 - -
Cone8ag1520 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 1023 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone8ag1520 1106 Gene3D - 602 790 IPR023214 -
Cone8ag1520 1106 Pfam Cation transport ATPase (P-type) 436 533 - -
Cone8ag1520 1106 FunFam Phospholipid-transporting ATPase 449 592 - -
Cone8ag1520 1106 MobiDBLite consensus disorder prediction 1048 1106 - -
Cone8ag1520 1106 NCBIfam phospholipid-translocating P-type ATPase 424 1023 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone8ag1520 1106 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Cone8ag1520 1106 Pfam E1-E2 ATPase 99 293 - -
Cone8ag1520 1106 Gene3D - 451 585 IPR023299 GO:0000166(InterPro)
Cone8ag1520 1106 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Cone8ag1520 1106 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Cone8ag1520 1106 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Cone8ag1520 1106 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Cone8ag1520 1106 NCBIfam HAD-IC family P-type ATPase 716 834 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0629 Cone-Chr8:6217396 Cone8ag1520 Cone-Chr8:11463080 1.65E-155 dispersed
Cone12ag1474 Cone-Chr12:10532489 Cone8ag1520 Cone-Chr8:11463080 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1520 K01530 - mdm:103444465 1961.42