Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1529 ATGGAAGCAGATCACGAGTACAGAAGCAAAGAAAGGATCGTACTAGTTTCCATCGTCGCGCTTGCTTCTCTAGCCCTAGCTTCGTTGTTCGTCGCCTTCTGCTATTACTTCTATATCAGCAACAAGATCTCCAGTCGTCTTAAGAAGCTCAAACGGGTTGATCATGGCGATAAAGTTGGTTTTGAAAATCTGAAAGTCGCTCCTGAGAAAGGACTTCAGGTATTCACCTACAAGCAGCTACACTCTGCAACTGGAGGTTTCAACAAGTCTAATGTGGTTGGGCATGGTGGCTTTGGGCTTGTATACAGAGGAGTGTTTAGCGATGGGAGAAAAGTTGCAATTAAATTAATGGATCAAGCTGGAAAGCAGGGAGAAGATGAATTTACAGTGGAGGTTGAATTGCTGAGTCGGCTTCGCTCTCCATATTTGCTGGCACTGCATGGGTATTGCGCAGATAACAATCATAAGTTGCTGGTGTATGAATTCATGGCGAATGGAGGTTTGCAGGAGCATCTGTATCCTGTTAGCAGTTCCAATTCTGTCTGCTTGAAGTTGGACTGGGACACACGGTTGAGAATTGCTCTTGAAGCTGCAAAAGGCTTGGAATATCTACATGAGCATGTCAGTCCTCCAGTGATTCACAGGGATTTCAAGAGCAGCAATATTTTGCTTGACAAAAATTTGCATGCCAAAGTTTCTGATTTTGGATTAGCTAAGATTGGATCTGACAAAGCAGGCGGGCATGTGTCTACTAGAGTACTGGGCACACAGGGATATGTTGCCCCTGAATATGCATTAACAGGCCATCTCACAACAAAGTCTGATGTGTACAGTTATGGGGTCGTCCTTTTAGAGCTACTCACAGGAAAAGTTCCAGTCGACATGAAAAGGCCTCCTGGAGAAGCTGCTATTGTTTCTTGGGCTTTGCCAAGGCTAACAGATAGAGACAAAGTTGTACAAATTATGGATTCTTCACTCGAGGGTCAGTACTCAATGAAGGATGTTATCCAGGTGGCAGCAATTGCTGCCATGTGCGTTCAACCCGAGGCAGATTACAGGCCTTTGATGGCTGATGTCGTCCAATCACTCGTCCCACTTGTTAAAACTCGCAGAGCAATGTCAAAGGTTGGTAGCAGTTCAAGCTTCATCATCACTAAGTCACCTACTACACACGATTTCGTCAAAGCAAGTGTAGAAGATCAATTGTGA 1209 44.67 MEADHEYRSKERIVLVSIVALASLALASLFVAFCYYFYISNKISSRLKKLKRVDHGDKVGFENLKVAPEKGLQVFTYKQLHSATGGFNKSNVVGHGGFGLVYRGVFSDGRKVAIKLMDQAGKQGEDEFTVEVELLSRLRSPYLLALHGYCADNNHKLLVYEFMANGGLQEHLYPVSSSNSVCLKLDWDTRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGKVPVDMKRPPGEAAIVSWALPRLTDRDKVVQIMDSSLEGQYSMKDVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTRRAMSKVGSSSSFIITKSPTTHDFVKASVEDQL 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11506065 11508145 - Conep08aG0157800.1 Cone8ag1529 444078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1529 402 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Cone8ag1529 402 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524(InterPro)
Cone8ag1529 402 FunFam Serine/threonine-protein kinase PBS1 56 162 - -
Cone8ag1529 402 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1529 402 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Cone8ag1529 402 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 380 - -
Cone8ag1529 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1529 402 Gene3D Phosphorylase Kinase; domain 1 67 162 - -
Cone8ag1529 402 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1529 402 CDD STKc_IRAK 93 366 - -
Cone8ag1529 402 PANTHER OS01G0750732 PROTEIN 19 388 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1765 Cone-Chr1:58262007 Cone8ag1529 Cone-Chr8:11506065 2.17E-108 dispersed
Cone3ag0098 Cone-Chr3:558490 Cone8ag1529 Cone-Chr8:11506065 2.64E-86 dispersed
Cone5ag0023 Cone-Chr5:152332 Cone8ag1529 Cone-Chr8:11506065 2.03E-130 dispersed
Cone7ag1677 Cone-Chr7:11238636 Cone8ag1529 Cone-Chr8:11506065 3.91E-90 dispersed
Cone8ag1529 Cone-Chr8:11506065 Cone11ag0794 Cone-Chr11:6350743 6.63E-98 dispersed
Cone1ag0211 Cone-Chr1:1272949 Cone8ag1529 Cone-Chr8:11506065 9.29E-27 wgd
Cone12ag1483 Cone-Chr12:10588937 Cone8ag1529 Cone-Chr8:11506065 4.05E-265 wgd
Cone6ag0948 Cone-Chr6:4951049 Cone8ag1529 Cone-Chr8:11506065 2.24E-33 wgd
Cone8ag1529 Cone-Chr8:11506065 Cone9ag0955 Cone-Chr9:4755392 6.81E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83146 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1529 - - - 0.0