Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1535 ATGGAGGATACACGAGATGATGTCGGGACAACAGAGCAAGGTCGTCCTAATGCTTCTTGGTGGACTTCAGATTTTATTGAAAAATTTGGATCCGTCTCCTTGGGTTCTGGTGAAGGAACCATAAGTAATAAAGAATTGCTTAGAAGGTCAGAGCAAGATGTGCTGTCACCTCAAAAGGCATCTCAAATTCTTTGGCGTACTGGAGTGCTTTCTGATCCTATCCCAAATGGCTTTTATTCCGTCATTCCAGAGAAAAGGCTGACGGAGCTCTTTGATAGCATTCCTACCCTGGCTGAGCTGCATGCTTTGGGGAGTGAAGGCTTCAAAGCTGATGTTATCCTTGTAGATTCTGAGAAAGATAAAAAGCTAGGTAACCTGAAGCGACTAATTTTGGCACTGGTTAAAGGATTAAATTCAAATCCAGCAGCAGTGATAAAGAAGATTGCTGGCCTTGTATCTGATGTTTATAAACGGCCAATCCTGGTAAGTCCAGCAAAATCAACCATAGTAGAAACCTTCCACATGTTTGATGATCGAGGTGTCCAGCTGCTGGGGCAAATAAAATATGGTTCATGCCGACCTCGTGCAATTTTATTTAAGGTTCTAGCAGATACTGTGGGTCTTGAAAGCAGCCTTATGGTGGGTTTGCCAAATGATGGCACCATTGGGTGTGTAGACTCATATAGGCACATGTCCGTTCTCGTTGTATTGAATTCTGTGGAACTGTTGGTTGATCTCATGCGATTCCCTGGCCAGTTGTTGCCTCGATCAACAAAGGCGATTTATATGACCCATATTTCTGCAGCAGGAGAGAGTGATTCTGCTGAAAATGACTCCTGTGATTCGCCACTAGAACCAAATAGTCCTCTATATGGGTTTTCAGAGAGAGTTGATCCAGATAGTGCTGAGAAAGATGAGAGCCCACAATTTCATCAAAAGTTTGAAGCATCTTCAAATGTATCAGGTCCTTCATTGCGGAATAAGATGTTGAGATCTGCTTCCTCTGTTAGTTTGTCACACAGTGAACCCAACATTCCAACTACATTTTGGAGGCGTAGTCGGAGAAAGGTCATTGCCGAGCAGCGGACTGCTAGTTCAAGTCCTGAGCATCCTTCATATCAAGCACGCGGACGATCCATGCTTAGTGGTGATAGGAAAGCATTTAGAGATTTTGCTGATGATGTGTCAACATCAAGATCAGATGGTGCTTCAACTTCAGAAGCTCGTCGATTAAGAAGAAGAGGCATGAGCATCACTCCCGAGATTGGTGATGATATCGTAAGGGCTGTGCGAGCAATGAATGAAACATTGAAGCAAAACTGTGTATTGAGGGAGGGTGGAATTGACGGGTCATTCTCCCATTCTTCAGATGACAGAAATAGTAATTCAGATGTTCAGAAAAATGCACCGAATTTTCACCTCAGTGGTCATGCTGAAGTTACTAGCAAAAGGTCTGCTCTGTATTCCCTTTCAAGAGACCAAGATGTATCACAAAGAGCAATGTCATTACCCTCATCTCCACATGATTATAGGAGTCAAACATCTGAGCAGAGTGGACCTTCAGGATCCATGATAAATGATGAATTGGTCTCAACATGGAATAAGGTACTTGAATCTTCCACGTTTGACAACAGACCTCTGTTACCTTACCAAGAGTGGAATATCGATTACTCAGAATTGACAGTTGGAAGGCGTATAGGAATTGGTTTCTTTGGAGAAGTTTTTTGTGGCATATGGAATGGAACAGATGTTGCAATCAAAGTTTTCCTGGAGCAAGATCTAACTGCTGAAAACATGGAAGACTTTTGCAATGAGATATCGATTCTTAGCCGTCTTCGACATCCTAATGTTATTTTATTTCTGGGTGCATGCACTAAGCCCCCACATCTGTCAATGGTTACGGAATACATGGAATATGGATCGTTATACTCATTGATCCATACGAGTGTGCAGAAGAAGAAGCTGAGCTGGCGGAGGAGACTAAAGATGCTGCGTGATATATGCAGGGGGCTGATGTGCATACATCGGATGAAAATAGTTCATCGTGACCTGAAAAGTGCGAATTGCCTTGTGAATAAGCACTGGACCATCAAGATCTGTGATTTTGGGCTCTCGAGAATAACGACCAATTTGCCCATAAAGGGTTCCTCCTCTGCTGGAACGCCTGAATGGATGGCTCCTGAGCTTTTTCGGAATGAACCATTCACTGAAAAATGTGATATTTTCAGCCTTGGGGTTATCATGTGGGAACTCTGTACTCTAAGAAGACCATGGGAAGGAGTGCCACCAGAGAGGGTAGGCTATGCAGTTGGGAGCAAGGGTTCTCGATTAGATATTCCTGAAGGTCCATTGGGCAGGCTAATATCAGATTGTTGGGGAGAACCACATGAACGTCCAAGTTGTGAGGAGATTCTCTCACGCTTGCTAGACTGTGAATACTCTCTCTGCTGA 2451 43.53 MEDTRDDVGTTEQGRPNASWWTSDFIEKFGSVSLGSGEGTISNKELLRRSEQDVLSPQKASQILWRTGVLSDPIPNGFYSVIPEKRLTELFDSIPTLAELHALGSEGFKADVILVDSEKDKKLGNLKRLILALVKGLNSNPAAVIKKIAGLVSDVYKRPILVSPAKSTIVETFHMFDDRGVQLLGQIKYGSCRPRAILFKVLADTVGLESSLMVGLPNDGTIGCVDSYRHMSVLVVLNSVELLVDLMRFPGQLLPRSTKAIYMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSAEKDESPQFHQKFEASSNVSGPSLRNKMLRSASSVSLSHSEPNIPTTFWRRSRRKVIAEQRTASSSPEHPSYQARGRSMLSGDRKAFRDFADDVSTSRSDGASTSEARRLRRRGMSITPEIGDDIVRAVRAMNETLKQNCVLREGGIDGSFSHSSDDRNSNSDVQKNAPNFHLSGHAEVTSKRSALYSLSRDQDVSQRAMSLPSSPHDYRSQTSEQSGPSGSMINDELVSTWNKVLESSTFDNRPLLPYQEWNIDYSELTVGRRIGIGFFGEVFCGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPHLSMVTEYMEYGSLYSLIHTSVQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTIKICDFGLSRITTNLPIKGSSSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLRRPWEGVPPERVGYAVGSKGSRLDIPEGPLGRLISDCWGEPHERPSCEEILSRLLDCEYSLC 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11531445 11540155 + Conep08aG0158400.1 Cone8ag1535 444084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1535 816 Gene3D Transferase(Phosphotransferase) domain 1 639 814 - -
Cone8ag1535 816 CDD STKc_MAP3K-like 566 808 - -
Cone8ag1535 816 ProSiteProfiles Protein kinase domain profile. 560 815 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1535 816 MobiDBLite consensus disorder prediction 359 416 - -
Cone8ag1535 816 MobiDBLite consensus disorder prediction 451 476 - -
Cone8ag1535 816 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Cone8ag1535 816 MobiDBLite consensus disorder prediction 382 396 - -
Cone8ag1535 816 ProSitePatterns Protein kinases ATP-binding region signature. 566 587 IPR017441 GO:0005524(InterPro)
Cone8ag1535 816 SUPERFAMILY Protein kinase-like (PK-like) 535 808 IPR011009 -
Cone8ag1535 816 MobiDBLite consensus disorder prediction 312 326 - -
Cone8ag1535 816 Gene3D Phosphorylase Kinase; domain 1 553 638 - -
Cone8ag1535 816 PANTHER SERINE-THREONINE PROTEIN KINASE 317 808 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone8ag1535 816 SMART serkin_6 560 809 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone8ag1535 816 MobiDBLite consensus disorder prediction 297 311 - -
Cone8ag1535 816 MobiDBLite consensus disorder prediction 492 524 - -
Cone8ag1535 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1535 816 Pfam Protein tyrosine and serine/threonine kinase 561 808 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone8ag1535 816 MobiDBLite consensus disorder prediction 453 470 - -
Cone8ag1535 816 FunFam Serine/threonine-protein kinase isoform 1 551 638 - -
Cone8ag1535 816 MobiDBLite consensus disorder prediction 272 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0327 Cone-Chr8:1876727 Cone8ag1535 Cone-Chr8:11531445 7.45E-67 dispersed
Cone8ag1535 Cone-Chr8:11531445 Cone16ag0263 Cone-Chr16:2923665 1.05E-46 dispersed
Cone1ag0233 Cone-Chr1:1509819 Cone8ag1535 Cone-Chr8:11531445 4.57E-26 wgd
Cone10ag1367 Cone-Chr10:10649005 Cone8ag1535 Cone-Chr8:11531445 0 wgd
Cone12ag1487 Cone-Chr12:10611532 Cone8ag1535 Cone-Chr8:11531445 0 wgd
Cone5ag1705 Cone-Chr5:12117338 Cone8ag1535 Cone-Chr8:11531445 7.22E-42 wgd
Cone6ag1010 Cone-Chr6:5633418 Cone8ag1535 Cone-Chr8:11531445 8.25E-42 wgd
Cone8ag1535 Cone-Chr8:11531445 Cone9ag1008 Cone-Chr9:5263645 4.38E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83147 PF00170 bZIP_1 7.20E-13 CL0018 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1535 - - - 0.0