Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1540 ATGGCTTCCTCCAAAGAACGCGAGAACTTTGTCTACGTCGCCAAGCTTGCTGAGCAGGCCGAGCGCTACGATGAGATGGTTGATGCAATGAAGAAGGTTGCAAACCTTGATATGGAATTGACAGTTGAAGAACGCAACTTGCTCTCTGTTGGGTACAAGAATGTGATTGGTGCCAGGAGAGCCTCATGGAGGATCCTATCATCAATAGAGCAGAATGAAGAAGGGAAAGGGAATGAAGTAAATGCAAAACGTATCAAGGAGTACAGACATAAGGTTGAGTCTGAGCTTTCAACTATCTGTGATGATATCATGAAGGTTATTGATGAACATCTAATACCTTCAGCTTCTGCTGGTGAATCAACAGTGTTTTACTATAAGATGAAAGGAGATTATTATCGATACCTTGCCGAATTTAAGGCTGGTAACGAGAAAAAAGAGTCTGCTGACCAGTCAATGAAAGCATACGAGGCAGCAACTAGCGCAGCTGAAGCAGATTTACCTCCTACACATCCTATCCGATTGGGTTTAGCTTTGAACTACTCTGTCTTCTATTATGAAATCATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAACATGCTTTTGATGAAGCAATCTCGGAACTTGACTCCCTGAATGAGGATTCATACAAAGATAGCACCTTAATCATGCAGCTCCTGAGGGACAACCTCACTCTGTGGACTTCTGACATCCCAGAGGAAGGAGAAGATTTGCAGAAGATCAATGTCACTGCCAAGAATGCTGGCGGGGATGATGCAGAGTGA 786 43.89 MASSKERENFVYVAKLAEQAERYDEMVDAMKKVANLDMELTVEERNLLSVGYKNVIGARRASWRILSSIEQNEEGKGNEVNAKRIKEYRHKVESELSTICDDIMKVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKAGNEKKESADQSMKAYEAATSAAEADLPPTHPIRLGLALNYSVFYYEIMNSPERACHLAKHAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDIPEEGEDLQKINVTAKNAGGDDAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11568544 11570635 + Conep08aG0158900.1 Cone8ag1540 444089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1540 261 PIRSF 14-3-3 1 247 IPR000308 -
Cone8ag1540 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cone8ag1540 261 PANTHER 14-3-3 PROTEIN 6 240 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone8ag1540 261 FunFam 14-3-3 protein epsilon 2 248 - -
Cone8ag1540 261 Gene3D - 1 250 IPR036815 -
Cone8ag1540 261 SMART 1433_4 7 248 IPR023410 -
Cone8ag1540 261 Pfam 14-3-3 protein 14 235 IPR023410 -
Cone8ag1540 261 Coils Coil 13 33 - -
Cone8ag1540 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cone8ag1540 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cone8ag1540 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0532 Cone-Chr6:2643159 Cone8ag1540 Cone-Chr8:11568544 8.17E-96 dispersed
Cone8ag0206 Cone-Chr8:1113875 Cone8ag1540 Cone-Chr8:11568544 1.13E-107 dispersed
Cone10ag1369 Cone-Chr10:10676164 Cone8ag1540 Cone-Chr8:11568544 2.66E-157 wgd
Cone12ag1494 Cone-Chr12:10639339 Cone8ag1540 Cone-Chr8:11568544 1.08E-172 wgd
Cone3ag1440 Cone-Chr3:33138335 Cone8ag1540 Cone-Chr8:11568544 5.37E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1540 K06630 - csv:101208446 455.292