Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone8ag1587 ATGAAAGAGGGTAGTGGAAGATCAAAACAAGGAGGAGGAGGGTTATCTCCATGCGCGGCATGCAAGCTTCTTCGAAGAAGATGTGGACAGGACTGTGTATTTGCACCTTACTTCCCGCCTGATCAGCCTCACAAGTTTGCTAGCGTCCACAAAGTTTTCGGGGCTAGTAATGTCAACAAGATGTTGCAGGAATTGCCGGAACATCAGCGGAGTGACGCGGTGAGTTCAATGGTGTACGAAGCGAACGCGAGGGTACGAGACCCTGTTTATGGTTGTGTGGGGGCGATTTCATCTTTGCAGCAACAAATTGATGTTCTCCAATCACAATTGGCGGTTGCTCAGGCCGAGGTTGTTCACTTGAGGATGCACCAGCATGATCTCCCTTCTACTACCTGTAACCCTTTACCCACCACCAATTGCAACAATATTATTAATTCACCACCTTCATCACCCAAATCCTATTTTTCCATGGATAATATGGGGGAGGGGGACTCTCTCTGGTCTTGCTAG 510 48.24 MKEGSGRSKQGGGGLSPCAACKLLRRRCGQDCVFAPYFPPDQPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQSQLAVAQAEVVHLRMHQHDLPSTTCNPLPTTNCNNIINSPPSSPKSYFSMDNMGEGDSLWSC 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11808670 11809774 + Conep08aG0164100.1 Cone8ag1587 444136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone8ag1587 169 Coils Coil 96 116 - -
Cone8ag1587 169 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Cone8ag1587 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 138 - -
Cone8ag1587 169 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1078 Cone-Chr11:8438866 Cone8ag1587 Cone-Chr8:11808670 6.53E-43 dispersed
Cone11ag1283 Cone-Chr11:9521027 Cone8ag1587 Cone-Chr8:11808670 3.03E-52 dispersed
Cone18ag0498 Cone-Chr18:2433576 Cone8ag1587 Cone-Chr8:11808670 8.44E-41 dispersed
Cone1ag1138 Cone-Chr1:55637710 Cone8ag1587 Cone-Chr8:11808670 1.10E-37 dispersed
Cone1ag1339 Cone-Chr1:56487374 Cone8ag1587 Cone-Chr8:11808670 1.91E-42 dispersed
Cone1ag1630 Cone-Chr1:57674187 Cone8ag1587 Cone-Chr8:11808670 4.27E-50 dispersed
Cone4ag0070 Cone-Chr4:352109 Cone8ag1587 Cone-Chr8:11808670 2.94E-55 dispersed
Cone5ag0152 Cone-Chr5:647674 Cone8ag1587 Cone-Chr8:11808670 4.14E-48 dispersed
Cone5ag0176 Cone-Chr5:730885 Cone8ag1587 Cone-Chr8:11808670 8.47E-48 dispersed
Cone5ag0326 Cone-Chr5:1378722 Cone8ag1587 Cone-Chr8:11808670 4.34E-44 dispersed
Cone5ag0845 Cone-Chr5:3624877 Cone8ag1587 Cone-Chr8:11808670 7.16E-12 dispersed
Cone7ag0064 Cone-Chr7:276888 Cone8ag1587 Cone-Chr8:11808670 5.07E-58 dispersed
Cone7ag1007 Cone-Chr7:7769199 Cone8ag1587 Cone-Chr8:11808670 3.63E-32 dispersed
Cone7ag1008 Cone-Chr7:7775944 Cone8ag1587 Cone-Chr8:11808670 2.92E-37 dispersed
Cone8ag1587 Cone-Chr8:11808670 Cone9ag1307 Cone-Chr9:9810044 8.00E-44 dispersed
Cone3ag1477 Cone-Chr3:33465382 Cone8ag1587 Cone-Chr8:11808670 1.36E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46757 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone8ag1587 - - - 0.0