Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1603 | ATGTCTTTGCCAGTGTTAAAGAAGGCGAACCAATCAAGTGCAACTAACCCAAAGGAAATTTCTGAAAAAGTGAAAGAAAGAGCTGATCCTGTTAGTTGTAGAGTGGGAAAGAAACCAGTACCACAAGCAGTCAATTCTAGAAGCCATCTCGGGAGGAATCGCACAAGTGATGGTTTCATTATGACGGGTCAAGCTAAGGTGGATGCTCGTGCATTGTCAAGAAAGTCTGTCAAGCGAATTGTGAAGACCACAGTAAAGGCATTCGACTGTAAAAGGACTTTGAGATCCAAGTTTGCATCTGGCATAATCAAACCAGTAACTGCTTCTGTGTCATCATCTAGGAATGATGAAGAAGTGGCATCCTCTCTTCCTGATAGCGTTGCTCATGAACCTGATCGACAAGAGGTTCCATCTGATAGAAACCAAAACCCAAGTACAAATACAATTATTAAGTTTAGAAGAAGATCTTATACATCAACATTAATGGCAGGGTCAAAGGTTGGGCTGTACTGTATGCTACTCCCACATTTTTCTGTTAGAGTATTCTCTTACAATTCTATTACTTTTCAGTTACTTGAGGAAAAACTACCAAGTATTGATGATCAGCTCAATCAACTGGAAGTTGCTGAATATGTTGATGATATTTACCAATATTATTGGGTTACAGAGTCACAGACTCCACCTTTGGCAGATTACATGTCGAAGCAGACACACATTTCCCCTCAGATGCGGGGCATACTGATCAACTGGTTAATTGAAGTACACTTAAAATTTGACTTGATGCATGAAACCCTATATCTCACAGTGGCATTGTTTGACTGGTATGTTTCGCAAGTAATTGTTAAGAAAGACGAGATGCAGTTGGTTGGTCTTACAGCACTGCTACTGGCATCAAAATATGAAGATTTTTGGCATCCCAGAGTTGAAGATTTGATTAGCATCTCAGCTAAACCATACACAAGAGATCAAATGCTGGAAATGGAAGTGATGATTCTGAAAAAGTTGAAATTTCGTCTGAATATACCCACTCTCTATGTCTTCATGTTAAGGTTCCTCAAAGCTGCTCAGTCCAATACAAAGCTTGAACACCTGTCATTTTACCTAATTGAGCTATGTTTAGTCGAGTATGAAGCTTTAAGGTTCAGGCCCTCATTGATATGTGCGTCAGCAATCTATGTTGCAAGGTGTACCCTGCAAATGACTCCATGTTGGAGTCCACTGCTTGGCAAACATACACGATATGAGGTGTCTCATATGAGGGAATGTGCGGAGATGATTTTAAAATTCCAAAAATATGGTGCAGGACAGTTGAGAGTAGCATATGACAAGTACATTGAAGCTGACTTTCTTGGTGTTGCAGCAGTGAAGCCTGTGGATAGGCTTCCTCTCTGA | 1392 | 40.37 | MSLPVLKKANQSSATNPKEISEKVKERADPVSCRVGKKPVPQAVNSRSHLGRNRTSDGFIMTGQAKVDARALSRKSVKRIVKTTVKAFDCKRTLRSKFASGIIKPVTASVSSSRNDEEVASSLPDSVAHEPDRQEVPSDRNQNPSTNTIIKFRRRSYTSTLMAGSKVGLYCMLLPHFSVRVFSYNSITFQLLEEKLPSIDDQLNQLEVAEYVDDIYQYYWVTESQTPPLADYMSKQTHISPQMRGILINWLIEVHLKFDLMHETLYLTVALFDWYVSQVIVKKDEMQLVGLTALLLASKYEDFWHPRVEDLISISAKPYTRDQMLEMEVMILKKLKFRLNIPTLYVFMLRFLKAAQSNTKLEHLSFYLIELCLVEYEALRFRPSLICASAIYVARCTLQMTPCWSPLLGKHTRYEVSHMRECAEMILKFQKYGAGQLRVAYDKYIEADFLGVAAVKPVDRLPL | 463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11871861 | 11874622 | - | Conep08aG0165800.1 | Cone8ag1603 | 444152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1603 | 463 | Gene3D | - | 334 | 462 | - | - | |
Cone8ag1603 | 463 | SUPERFAMILY | Cyclin-like | 205 | 340 | IPR036915 | - | |
Cone8ag1603 | 463 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Cone8ag1603 | 463 | MobiDBLite | consensus disorder prediction | 110 | 147 | - | - | |
Cone8ag1603 | 463 | FunFam | putative cyclin-B3-1 isoform X3 | 338 | 462 | - | - | |
Cone8ag1603 | 463 | CDD | CYCLIN_CCNB1-like_rpt1 | 208 | 337 | - | - | |
Cone8ag1603 | 463 | PANTHER | CYCLINS | 198 | 430 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone8ag1603 | 463 | SMART | cyclin_7 | 346 | 428 | IPR013763 | - | |
Cone8ag1603 | 463 | SMART | cyclin_7 | 249 | 333 | IPR013763 | - | |
Cone8ag1603 | 463 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Cone8ag1603 | 463 | PIRSF | Cyclin_A_B_D_E | 4 | 461 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone8ag1603 | 463 | SUPERFAMILY | Cyclin-like | 341 | 459 | IPR036915 | - | |
Cone8ag1603 | 463 | FunFam | Cyclin N-terminal domain containing 2 | 229 | 337 | - | - | |
Cone8ag1603 | 463 | Gene3D | - | 229 | 333 | - | - | |
Cone8ag1603 | 463 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cone8ag1603 | 463 | SMART | Cyclin_C_2 | 342 | 458 | IPR004367 | - | |
Cone8ag1603 | 463 | Pfam | Cyclin, N-terminal domain | 214 | 340 | IPR006671 | - | |
Cone8ag1603 | 463 | Pfam | Cyclin, C-terminal domain | 342 | 456 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag1603 | Cone-Chr8:11871861 | Cone9ag1624 | Cone-Chr9:11579755 | 6.16E-50 | dispersed | |
Cone8ag1603 | Cone-Chr8:11871861 | Cone17ag1451 | Cone-Chr17:9849759 | 7.76E-74 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1603 | K21777 | - | mdm:103445884 | 507.679 |