Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone8ag1607 | ATGTTCCATCCCAAGAAGCCTTCAACTATGAATTCCCATGAGAGACCCAACATGCACTGCGTCCAACATGCTGACTCTGGCCTTGTCCTCACCACTGACCCCAAACCCCGCCTCCGCTGGACGGTTGAGCTCCACGAGCGCTTTGTCGACGCTGTCAGTCAGCTTGGAGGCCCCGATAAAGCCACCCCAAAGACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACTCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCTCACAAGGAATTCAATGATCATTCAATTAAGGATGGTTCGGCTTTAGAACTTCAACGAAACAGTGCGCCTTCTTCCAGCATAATGGGTCGCAGTATGAATGATAACTCACACATGGTTGATGCAATCAGGATGCAAATGGAAGTGCAGCGAAGACTGCATGAACAATTAGAGGTGCAGAGACACCTTCAGTTGAGGATAGAAGCCCAAGGAAAATACATGCAAAGTATATTGGAGAGGACTTGCAAAACGCTTGCAGGTGAGAATATGGCCTCCGGATCTCATAAAAGCATTCATGGATTCACTCATTATAATCATCATCATCATCAAGCTGGTGTTCCCCTTGACATGGAACCGGCCATCAAAGATTTTGGTTCCCCTCTCAATTTTCCATCCTTCCAAGACCTTAGCATATATGGACCGGATCACGGCCAACTTGATCTTCAAGTACACAACAGCAATATGGATAGATCACCTAACGCCGCAAATCTGGATAGTTTTTTGCCTATTAATGATACAATTAACATGCGCACGGGAAAGAAGAGAATAAGCCCTAACTACAATAGAAGTGGGAAGAACATCTCCTTCTTGGACTGGCCGGATGATTTAGCACGGGGCCAAGATATACTATCGTCAGGCACTTCATCATCGTGCGATAATTCGGACCCGTTCAAAGGCGGCGACCATGTTCGTGATATGGATCAGATTCAGAGAGGTAGCGGAACTAGTACAAGTAATTTAGACAGCATCATGGTAATGACTTCAGACATGTGCGAAACAAAGCCTACTAGCACTCTTAGTCTAATCGGATAA | 1089 | 45.73 | MFHPKKPSTMNSHERPNMHCVQHADSGLVLTTDPKPRLRWTVELHERFVDAVSQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGSALELQRNSAPSSSIMGRSMNDNSHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILERTCKTLAGENMASGSHKSIHGFTHYNHHHHQAGVPLDMEPAIKDFGSPLNFPSFQDLSIYGPDHGQLDLQVHNSNMDRSPNAANLDSFLPINDTINMRTGKKRISPNYNRSGKNISFLDWPDDLARGQDILSSGTSSSCDNSDPFKGGDHVRDMDQIQRGSGTSTSNLDSIMVMTSDMCETKPTSTLSLIG | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11908305 | 11910197 | + | Conep08aG0166300.1 | Cone8ag1607 | 444156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone8ag1607 | 362 | Gene3D | - | 34 | 92 | - | - | |
Cone8ag1607 | 362 | Pfam | MYB-CC type transfactor, LHEQLE motif | 131 | 176 | IPR025756 | - | |
Cone8ag1607 | 362 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 35 | 90 | IPR006447 | GO:0003677(InterPro) | |
Cone8ag1607 | 362 | Pfam | Myb-like DNA-binding domain | 37 | 87 | IPR001005 | - | |
Cone8ag1607 | 362 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 32 | 92 | IPR017930 | - | |
Cone8ag1607 | 362 | MobiDBLite | consensus disorder prediction | 300 | 339 | - | - | |
Cone8ag1607 | 362 | MobiDBLite | consensus disorder prediction | 300 | 314 | - | - | |
Cone8ag1607 | 362 | FunFam | Myb family transcription factor | 34 | 92 | - | - | |
Cone8ag1607 | 362 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 14 | 228 | IPR046955 | GO:0003700(InterPro) | |
Cone8ag1607 | 362 | SUPERFAMILY | Homeodomain-like | 34 | 90 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0518 | Cone-Chr12:3547407 | Cone8ag1607 | Cone-Chr8:11908305 | 1.42E-36 | dispersed | |
Cone4ag0401 | Cone-Chr4:1822889 | Cone8ag1607 | Cone-Chr8:11908305 | 9.42E-53 | dispersed | |
Cone7ag0390 | Cone-Chr7:1718930 | Cone8ag1607 | Cone-Chr8:11908305 | 1.29E-48 | dispersed | |
Cone8ag0716 | Cone-Chr8:7215291 | Cone8ag1607 | Cone-Chr8:11908305 | 3.33E-08 | dispersed | |
Cone8ag1607 | Cone-Chr8:11908305 | Cone9ag0583 | Cone-Chr9:2748275 | 1.04E-31 | dispersed | |
Cone10ag1448 | Cone-Chr10:11222271 | Cone8ag1607 | Cone-Chr8:11908305 | 8.66E-83 | wgd | |
Cone3ag1514 | Cone-Chr3:33669386 | Cone8ag1607 | Cone-Chr8:11908305 | 1.52E-82 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46758 | PF00454 | PI3_PI4_kinase | 4.40E-18 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone8ag1607 | - | - | - | 0.0 |