Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0012 | ATGGTTGACGATGGAGTGAAACAGCCCTTGCTACCAGGATTTAATGTTCCTCCGAGAAGAAGATTTCGGCATTGTAGAAGTGCTCCGCCTGTGGAGTCTCTTCCTATGGAGACGAATGGCATCAGCCTGAATGCACGATCTGGAGCCATGTTTGGGAACATGCACCCGAATTTCAGAGCGGTAACCATCTATTTAGCTGCCTACTTAGGTGTGGGAACTGTATGTTTCTACTTGGTCAGTAACCAGATCAAGGGGGAAAAGACAGATGCAATAATTGACGCTGTTTACTTTGTCATTGTTACGATGACAACTGTTGGATATGGAGACCTTGTACCAAACAGTAACCTCACAAAGCTATTAGCTTGTGCTTTTGTCTTCACAGGGATGGCTTTGGTTGCCCTCGTACTTAGCAGAGCTGCTGACTCTTTGGTCGAGAAGCAGGAGATATTGCTGGTTAAGGCCCTACATAAACATGATAAGGACCGACCAGTGGAGAGCACGAAAGAAATAGATACGAATAAAGAGAAAATCAAGTGCTCAATGGTCTCTTCCATTCTTCTGCTGCTTATAGTTTGCGGGACCATTTTTCTAATATATGTTGAGAAATTGGACCCGGTTGATGCATTTTATTGTGTTTGTTCTACCATTACAACTCTAGGGTATGGAGATAAGAGCTTCTCAACAAGTGAAGGGCGTGTGTTTGCAATATTCTGGATTTTGACAAGCACCATTTGTTTGGCTCAAGTTTTCCTTTATATTGCCGAACTAAACACAGTAACAAGGCAAAGGGCATTTGTGAAGTGGGTTCTGAATAGGAAGGTGACAAGGTCGGATCTGGAGGCAGCTGATCTGAATGATGATGGTACTGTGGAGGCAGCTGAGTTTGTGATATACAAGCTGAAAGAGATGGGGAAGATTAGTCAGGATGATATCTGTGTTTTATTGAGAGAGTTTGAGGATCTTGATGTTGATCAGTCGGGGACATTGTCAGTAGCCGATATCACACTTGCTCAGTAG | 1017 | 43.56 | MVDDGVKQPLLPGFNVPPRRRFRHCRSAPPVESLPMETNGISLNARSGAMFGNMHPNFRAVTIYLAAYLGVGTVCFYLVSNQIKGEKTDAIIDAVYFVIVTMTTVGYGDLVPNSNLTKLLACAFVFTGMALVALVLSRAADSLVEKQEILLVKALHKHDKDRPVESTKEIDTNKEKIKCSMVSSILLLLIVCGTIFLIYVEKLDPVDAFYCVCSTITTLGYGDKSFSTSEGRVFAIFWILTSTICLAQVFLYIAELNTVTRQRAFVKWVLNRKVTRSDLEAADLNDDGTVEAAEFVIYKLKEMGKISQDDICVLLREFEDLDVDQSGTLSVADITLAQ | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 59796 | 62396 | - | Conep09aG0001200.1 | Cone9ag0012 | 444175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0012 | 338 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 61 | 284 | IPR003280 | GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER) | |
Cone9ag0012 | 338 | FunFam | Calcium-activated outward-rectifying potassium channel 1 | 55 | 150 | - | - | |
Cone9ag0012 | 338 | SUPERFAMILY | EF-hand | 277 | 334 | IPR011992 | - | |
Cone9ag0012 | 338 | ProSitePatterns | EF-hand calcium-binding domain. | 322 | 334 | IPR018247 | - | |
Cone9ag0012 | 338 | ProSitePatterns | EF-hand calcium-binding domain. | 283 | 295 | IPR018247 | - | |
Cone9ag0012 | 338 | Gene3D | - | 54 | 149 | - | - | |
Cone9ag0012 | 338 | Gene3D | - | 164 | 265 | - | - | |
Cone9ag0012 | 338 | Pfam | Ion channel | 64 | 144 | IPR013099 | - | |
Cone9ag0012 | 338 | Pfam | Ion channel | 185 | 256 | IPR013099 | - | |
Cone9ag0012 | 338 | SUPERFAMILY | Voltage-gated potassium channels | 178 | 275 | - | - | |
Cone9ag0012 | 338 | SUPERFAMILY | Voltage-gated potassium channels | 58 | 151 | - | - | |
Cone9ag0012 | 338 | PRINTS | Two pore domain K+ channel signature | 100 | 128 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Cone9ag0012 | 338 | PRINTS | Two pore domain K+ channel signature | 217 | 226 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag1609 | Cone-Chr5:11296569 | Cone9ag0012 | Cone-Chr9:59796 | 6.96E-58 | dispersed | |
Cone9ag0012 | Cone-Chr9:59796 | Cone9ag0915 | Cone-Chr9:4502453 | 2.87E-50 | dispersed | |
Cone6ag0013 | Cone-Chr6:94055 | Cone9ag0012 | Cone-Chr9:59796 | 4.56E-208 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0012 | K05389 | - | gmx:100800137 | 434.876 |