Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0013 ATGCCTCGCTTTTTCCCTCTCTTCCTCTTCCTCTGCCTCTTCCTCCTCATCCCCACCTCTGCCCACGGCGGCCACGATGAGGATGCTGATAACGACCCCCCCTCCGCCGGAGATAATCCCAACCTCCGGTCAAAGGCTCTCATCCTTGTCAAAATCTGGTGCTTGCTCTTGATTTTTATCGGGACATTTGTGGCGGGAGTGTCGCCCTACTTCTTGAAATGGAACGAGGGGTTCCTGCTCCTGGGCACGCAGTTCGCAGGGGGCATCTTTCTGGGGACAGCTCTCATGCATTTTCTGAGTGATGCCAACGAGACCTTTCGGGATTTGACGGAGAAGGAGTACCCTTTTGCCTTCATGCTGGCCTCTTTTGGCTATCTGATCACCATGTCCGTTGACGTCCTCATTCATTATCTGCATGCCAAGCACAAGCACAACCTCGCTGACTCGCACTCTCCTCCCAGTGGAGGATGTAAGGGGGATGTCGTCCAGCTTGAACAAGGACAACAAGCGGTACTAGACGCAGGCAGAAAAAGCATCGCTTCAGTTGCTGATACACTTCTCTTGATCATTGCTCTGTGCTTCCACTCGGTCTTTGAGGGAATTGCAATTGGAGTTGCTGAGACTAAAGCCGACGCATGGAAAGCCCTCTGGACAATCTCACTTCACAAGGTATTTGCAGCCATAGCCATGGGTATTGCTCTCCTCCGTATGCTTCCAAACCGTCCCCTGCTCTCGTGCGCAGCCTATGCCTTTGCATTCGCCATCTCAAGCCCCATCGGCGTGGCCATTGGAATCGTAATAGATGCCACCACTCAAGGTTCTGTAGCTGATTGGATATTTGCCATTTCTATGAGTCTAGCATGCGGCGTCTTTATTTTTGTCACCATAAACCATCTCATATCTAAGGGCTACACCCCTCACAGGGATGTTTCTGTCGACAAACCTCATCTCAGGTTTTTGGCAGTTTTGTTAGGCGTAGGAGTTATCGCTGTTGTTATGATTTGGGATACTTGA 1014 50.99 MPRFFPLFLFLCLFLLIPTSAHGGHDEDADNDPPSAGDNPNLRSKALILVKIWCLLLIFIGTFVAGVSPYFLKWNEGFLLLGTQFAGGIFLGTALMHFLSDANETFRDLTEKEYPFAFMLASFGYLITMSVDVLIHYLHAKHKHNLADSHSPPSGGCKGDVVQLEQGQQAVLDAGRKSIASVADTLLLIIALCFHSVFEGIAIGVAETKADAWKALWTISLHKVFAAIAMGIALLRMLPNRPLLSCAAYAFAFAISSPIGVAIGIVIDATTQGSVADWIFAISMSLACGVFIFVTINHLISKGYTPHRDVSVDKPHLRFLAVLLGVGVIAVVMIWDT 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 83220 85691 + Conep09aG0001300.1 Cone9ag0013 444176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0013 337 Pfam ZIP Zinc transporter 49 332 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone9ag0013 337 PANTHER ZINC/IRON TRANSPORTER 47 335 - GO:0005385(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1044 Cone-Chr4:9090470 Cone9ag0013 Cone-Chr9:83220 4.33E-120 dispersed
Cone7ag1083 Cone-Chr7:8226035 Cone9ag0013 Cone-Chr9:83220 8.71E-123 dispersed
Cone15ag1232 Cone-Chr15:9771990 Cone9ag0013 Cone-Chr9:83220 1.85E-116 wgd
Cone6ag0014 Cone-Chr6:98764 Cone9ag0013 Cone-Chr9:83220 9.08E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0013 K14709 - sly:100037509 445.662