Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0037 | ATGACAGAAATGATCGACAGTTTGAGGAATCCTGTTGTTAATGAACCTCGGCTTGTTGCGAGAAAGGTTCTGGCGAGGACTCAACATGACGGACTGGGTGCTATTGTTAGGAGGAGCATAGGACGGTTTGATGTTGGGTACTTTGACCCTTTTCTTGGCTTGGATGAGTTTTCAGTCACTGCTCCTGCTGGATTTCTTGATCATCCACACAGAGGGTTTGAGACAGTGACATACATGCTGCAGGGAGCTGTAACACACGAAGATTTTGAAGGACACAAAGGAACAATAGGTGCGGGTGATTTACAATGGATGACGGCTGGAAGAGGAATAGTTCATTCAGAAATGCCTGCGAGCCAAGGCACCCAAACGGGCTTACAGCTCTGGGTCAACCTCTCCTCCAAATACAAAATGATAGAACCGAGGTATCAGGAAATGCTTAGTGAGGACATTGCAGAAGCTGAAGAAGATGGAGTAAAAGTGAGAGTAATAGCAGGGGAGTCCTTGGGAACAAGGTCACCAATTCACACAAAAACTCCTACCATGTTCTTAGACTTTACCCTCAGACCAGGAGCTAATCTTCAGCAGTCAATACCCATGTCTTGGAATGCATTTGTTTACGTCTTAGAAGGCGAGGGTATTTTCGGAACTCTCGAGTCATCATCTACGGCAGCATATTACCTTCTTCTTCTGGGCTCTGGGGATGGTTTGGAGGTATGGAACAAGTCCAGTAAGCCACTCAGGTTTGTCTTAGTAGGGGGTGAGCCATTGGGTGAACCTGTTGCGCAGTATGGGCCTTTTGTGATGAACACCCAAGAAGAGATTAATCAGACAATTGATGATTTTGAGAACTGCACAAATGGATTTGAGAAAGTTAGACAATGGAAATCAGAAGCTGCTCGTCGTCTTGCTTACTGA | 915 | 45.68 | MTEMIDSLRNPVVNEPRLVARKVLARTQHDGLGAIVRRSIGRFDVGYFDPFLGLDEFSVTAPAGFLDHPHRGFETVTYMLQGAVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPASQGTQTGLQLWVNLSSKYKMIEPRYQEMLSEDIAEAEEDGVKVRVIAGESLGTRSPIHTKTPTMFLDFTLRPGANLQQSIPMSWNAFVYVLEGEGIFGTLESSSTAAYYLLLLGSGDGLEVWNKSSKPLRFVLVGGEPLGEPVAQYGPFVMNTQEEINQTIDDFENCTNGFEKVRQWKSEAARRLAY | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 158582 | 160073 | - | Conep09aG0003700.1 | Cone9ag0037 | 444200 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0037 | 304 | CDD | cupin_pirin_C | 179 | 255 | - | - | |
Cone9ag0037 | 304 | Gene3D | Jelly Rolls | 30 | 282 | IPR014710 | - | |
Cone9ag0037 | 304 | FunFam | pirin | 30 | 162 | - | - | |
Cone9ag0037 | 304 | PANTHER | PIRIN-RELATED | 13 | 297 | IPR012093 | - | |
Cone9ag0037 | 304 | PIRSF | Pirin | 15 | 295 | IPR012093 | - | |
Cone9ag0037 | 304 | CDD | cupin_pirin_N | 34 | 131 | - | - | |
Cone9ag0037 | 304 | Pfam | Pirin C-terminal cupin domain | 183 | 287 | IPR008778 | - | |
Cone9ag0037 | 304 | Pfam | Pirin | 47 | 129 | IPR003829 | - | |
Cone9ag0037 | 304 | SUPERFAMILY | RmlC-like cupins | 17 | 296 | IPR011051 | - | |
Cone9ag0037 | 304 | Gene3D | Jelly Rolls | 151 | 256 | IPR014710 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0632 | Cone-Chr11:4131211 | Cone9ag0037 | Cone-Chr9:158582 | 2.06E-143 | dispersed | |
Cone18ag0872 | Cone-Chr18:6073918 | Cone9ag0037 | Cone-Chr9:158582 | 6.02E-143 | dispersed | |
Cone6ag0035 | Cone-Chr6:209648 | Cone9ag0037 | Cone-Chr9:158582 | 1.39E-203 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0037 | K06911 | - | rcu:8277559 | 482.256 |