Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0037 ATGACAGAAATGATCGACAGTTTGAGGAATCCTGTTGTTAATGAACCTCGGCTTGTTGCGAGAAAGGTTCTGGCGAGGACTCAACATGACGGACTGGGTGCTATTGTTAGGAGGAGCATAGGACGGTTTGATGTTGGGTACTTTGACCCTTTTCTTGGCTTGGATGAGTTTTCAGTCACTGCTCCTGCTGGATTTCTTGATCATCCACACAGAGGGTTTGAGACAGTGACATACATGCTGCAGGGAGCTGTAACACACGAAGATTTTGAAGGACACAAAGGAACAATAGGTGCGGGTGATTTACAATGGATGACGGCTGGAAGAGGAATAGTTCATTCAGAAATGCCTGCGAGCCAAGGCACCCAAACGGGCTTACAGCTCTGGGTCAACCTCTCCTCCAAATACAAAATGATAGAACCGAGGTATCAGGAAATGCTTAGTGAGGACATTGCAGAAGCTGAAGAAGATGGAGTAAAAGTGAGAGTAATAGCAGGGGAGTCCTTGGGAACAAGGTCACCAATTCACACAAAAACTCCTACCATGTTCTTAGACTTTACCCTCAGACCAGGAGCTAATCTTCAGCAGTCAATACCCATGTCTTGGAATGCATTTGTTTACGTCTTAGAAGGCGAGGGTATTTTCGGAACTCTCGAGTCATCATCTACGGCAGCATATTACCTTCTTCTTCTGGGCTCTGGGGATGGTTTGGAGGTATGGAACAAGTCCAGTAAGCCACTCAGGTTTGTCTTAGTAGGGGGTGAGCCATTGGGTGAACCTGTTGCGCAGTATGGGCCTTTTGTGATGAACACCCAAGAAGAGATTAATCAGACAATTGATGATTTTGAGAACTGCACAAATGGATTTGAGAAAGTTAGACAATGGAAATCAGAAGCTGCTCGTCGTCTTGCTTACTGA 915 45.68 MTEMIDSLRNPVVNEPRLVARKVLARTQHDGLGAIVRRSIGRFDVGYFDPFLGLDEFSVTAPAGFLDHPHRGFETVTYMLQGAVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPASQGTQTGLQLWVNLSSKYKMIEPRYQEMLSEDIAEAEEDGVKVRVIAGESLGTRSPIHTKTPTMFLDFTLRPGANLQQSIPMSWNAFVYVLEGEGIFGTLESSSTAAYYLLLLGSGDGLEVWNKSSKPLRFVLVGGEPLGEPVAQYGPFVMNTQEEINQTIDDFENCTNGFEKVRQWKSEAARRLAY 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 158582 160073 - Conep09aG0003700.1 Cone9ag0037 444200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0037 304 CDD cupin_pirin_C 179 255 - -
Cone9ag0037 304 Gene3D Jelly Rolls 30 282 IPR014710 -
Cone9ag0037 304 FunFam pirin 30 162 - -
Cone9ag0037 304 PANTHER PIRIN-RELATED 13 297 IPR012093 -
Cone9ag0037 304 PIRSF Pirin 15 295 IPR012093 -
Cone9ag0037 304 CDD cupin_pirin_N 34 131 - -
Cone9ag0037 304 Pfam Pirin C-terminal cupin domain 183 287 IPR008778 -
Cone9ag0037 304 Pfam Pirin 47 129 IPR003829 -
Cone9ag0037 304 SUPERFAMILY RmlC-like cupins 17 296 IPR011051 -
Cone9ag0037 304 Gene3D Jelly Rolls 151 256 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0632 Cone-Chr11:4131211 Cone9ag0037 Cone-Chr9:158582 2.06E-143 dispersed
Cone18ag0872 Cone-Chr18:6073918 Cone9ag0037 Cone-Chr9:158582 6.02E-143 dispersed
Cone6ag0035 Cone-Chr6:209648 Cone9ag0037 Cone-Chr9:158582 1.39E-203 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0037 K06911 - rcu:8277559 482.256