Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0067 | ATGAAGCTCGTCGCCGCCGCAAGAGTCCGTCGAGCACAGGAGGCGGTTATCAATGGCAGACCCTTCGCGGATACCCTTGTAGAAGTTTACAGCATCAACGAACACCTTCGAGAAGATTCCGTAGATATTCCATTAACAAATGTCCGTCCTGTTAAGAAAATCGCCCTTGTGGTGATCACCGGCGATCGAGGCCTTTGCGGCGGTTTCAACACTGCAGTGATCAAGAAAGCAGAGACTCGAATAGCTGAATTGAAGAATCTCGGCTTGGATTATACTCTGATCAGTGTTGGAGCTCAAAGGATTGCAGACGCTGTTTTTGCACTATTTGTTAGTGAAGATGTTGATAAGGTCGAATTGATTTATGCCAAGTTCGTCTCCTTGGTTAAATCCGATCCTGTGATTCATACATTGCTTCCATTATCTCCAAAAGGAGGAATTCTTGATGTGAATGGAAATTGTGTTGATGTGATGGAAGATGCGTTTTTTAGGTTGACTACAAAGGAAGGGAATTTGGATGCAGAGAGGGAAAGTGTGAGGAAAACGAAGAAGGAGAAGGGAGAGGCTTTTTCACTGTTGCTGCAATTCGAGCGGGATCCGCTTCAAATTCTTGATGCAACGCTGCCTTTGTATTTGAACAGTCAGGTTTTGAGAGCATTGCTGGAATCAATAGCAAGTGAGTTAGCTTCAAGGATGAGTGCTATGAGTAATGTAACTGATAATGCAGATGAATTGAAGAAATCTCTTTCTGCGGTTTATGATCGGCAAAGCCAGGCGAAAACTACAGGCGAGATTTTGGAGATTGTTGCTGGAGCTGAGTCATTATCAGAGTTTCATTAG | 837 | 43.97 | MKLVAAARVRRAQEAVINGRPFADTLVEVYSINEHLREDSVDIPLTNVRPVKKIALVVITGDRGLCGGFNTAVIKKAETRIAELKNLGLDYTLISVGAQRIADAVFALFVSEDVDKVELIYAKFVSLVKSDPVIHTLLPLSPKGGILDVNGNCVDVMEDAFFRLTTKEGNLDAERESVRKTKKEKGEAFSLLLQFERDPLQILDATLPLYLNSQVLRALLESIASELASRMSAMSNVTDNADELKKSLSAVYDRQSQAKTTGEILEIVAGAESLSEFH | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 316838 | 317760 | - | Conep09aG0006700.1 | Cone9ag0067 | 444230 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0067 | 278 | PRINTS | ATP synthase gamma subunit signature | 252 | 273 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | PRINTS | ATP synthase gamma subunit signature | 221 | 240 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | PRINTS | ATP synthase gamma subunit signature | 51 | 70 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | Gene3D | - | 99 | 141 | - | - | |
| Cone9ag0067 | 278 | CDD | F1-ATPase_gamma | 1 | 271 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 98 | 274 | IPR000131 | GO:0000275(PANTHER)|GO:0009535(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER) | |
| Cone9ag0067 | 278 | Pfam | ATP synthase | 98 | 274 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | Pfam | ATP synthase | 1 | 98 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | FunFam | ATP synthase gamma chain, chloroplastic | 1 | 45 | - | - | |
| Cone9ag0067 | 278 | Gene3D | - | 4 | 98 | - | - | |
| Cone9ag0067 | 278 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 1 | 274 | IPR035968 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
| Cone9ag0067 | 278 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 160 | 274 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag1091 | Cone-Chr6:6652794 | Cone9ag0067 | Cone-Chr9:316838 | 2.70E-128 | dispersed | |
| Cone6ag0055 | Cone-Chr6:304524 | Cone9ag0067 | Cone-Chr9:316838 | 7.90E-162 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0067 | K02115 | - | vvi:100264091 | 383.645 |