Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0082 ATGGAAGGGATTGTTGTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTAGGGTATGTCATGGACCATGACCAGAAGAAGGCTCCTGAACTAAGACAGGTCATTGCTGCAACAGTAGCTAGTGATCCATCAAATTATTCTGAAGCATTCCTTGGAAAGCCAAACAACGAGTATTGTGCTTGGATTCTTGACTCGGAGAAGTGGGGAGGTGCCATTGAGCTTGCGATACTAGCAGAGTATTATGGTCGTGAAATTGCAGCACATGATATCCAGACCACAAGATGTGACTTGTATGGTCAGGAAAAGGGGTATTCAGAAAGAGTTATGCTGATTTACGATGGGCTACACTATGATGCTTTAGCCGTATCTCCATTTGAGGGGGCTCCTGAGGAGTTCGACCAGACTGTATTCTCCGTGCAGAATGACAGAACAATTGGACCAGTTGAAGGGCTAGCTCTCAATTTCGTTAAAGACCAACAAAGGAAAAGGAGTTATACCGACACCGCTAACTTCACGTTACGCTGTGGGGTGTGCCAAATTGGAGTGATTGGCCAGAAGGAGGCTGTAGAGCATGCACAGGCGACCGGCCATGTCAATTTTCAAGAATATAGGTGA 627 45.77 MEGIVVRRVIPSDNSCLFNAVGYVMDHDQKKAPELRQVIAATVASDPSNYSEAFLGKPNNEYCAWILDSEKWGGAIELAILAEYYGREIAAHDIQTTRCDLYGQEKGYSERVMLIYDGLHYDALAVSPFEGAPEEFDQTVFSVQNDRTIGPVEGLALNFVKDQQRKRSYTDTANFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 363697 365495 - Conep09aG0008200.1 Cone9ag0082 444245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0082 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
Cone9ag0082 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Cone9ag0082 208 CDD OTU_plant_OTU1_2-like 3 166 - -
Cone9ag0082 208 Pfam OTU-like cysteine protease 11 116 IPR003323 -
Cone9ag0082 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 206 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
Cone9ag0082 208 Gene3D - 1 173 - -
Cone9ag0082 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0067 Cone-Chr6:353580 Cone9ag0082 Cone-Chr9:363697 1.52E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0082 K13719 - rcu:8279838 387.111