Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0084 ATGGTTGAGGTCGACATTCAGATTCCAAGTGCTTTCGATCCATTTGCTGAAGCTAAAGATTCAGATGCCCCCGGAAACAAGGAGTATGTGCATATTAGAGTTCAGCAAAGGAACGGAAAGAAATGTCTGACAACTGTTCAAGGCCTTAAGAAAGATTTCAGCTACGAGAAGATCCTTAAGGACGTCAAGAAGGAATTTTGTTGTAATGGGAATGTTGTTCAGGACAAAGAGCTCGGCAAGATAATTCAACTCCAAGGCGATCAGCGTAAGAACGTCTCGCAGTTTCTTGTCCAGGCTGGTATTGTCAAGAAGGATCAGATCAAGATTCACGGCTTTTGA 339 43.07 MVEVDIQIPSAFDPFAEAKDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 368946 369958 - Conep09aG0008400.1 Cone9ag0084 444247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0084 112 Pfam Translation initiation factor SUI1 27 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone9ag0084 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Cone9ag0084 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone9ag0084 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cone9ag0084 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743(InterPro)
Cone9ag0084 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743(InterPro)
Cone9ag0084 112 Gene3D - 1 112 - -
Cone9ag0084 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - GO:0003723(PANTHER)
Cone9ag0084 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1386 Cone-Chr12:10243169 Cone9ag0084 Cone-Chr9:368946 2.03E-57 dispersed
Cone14ag1124 Cone-Chr14:9356178 Cone9ag0084 Cone-Chr9:368946 2.03E-59 dispersed
Cone15ag1143 Cone-Chr15:9273928 Cone9ag0084 Cone-Chr9:368946 2.03E-59 dispersed
Cone9ag0084 Cone-Chr9:368946 Cone9ag0099 Cone-Chr9:430680 4.73E-54 dispersed
Cone6ag0069 Cone-Chr6:358748 Cone9ag0084 Cone-Chr9:368946 5.87E-77 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0084 K03113 - csv:101202908 219.935