Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0106 ATGAAAATTCAAGGATATAGGGGTGTAGCGAGAAGAATTTGTTTAACTGTTGTGGTTTACCTGATATGTGCTTCAGCTGCAACTAGTTCAGATAACAAAGAGACAGAAGAAGTCTTCTTGAGTCAATTAGCTGACCCAGAGACTGGGCAGGTCGATTCTAGCTTGGCTGAACTATTGCGAATCAATTGCAACCTAGATTTGGTACATTTGAAGGAGTTTGATAACAGTATTGACTTATGCGTATCTGAACAAGGGTCTGGTAGCAACGGTGAGATCCATTCAGAATGTTGGTTTGCAAAAAATGAACAGATACGGAGAACCTTTAGCGTCCTGCGTTCCCAGTTGAGGCAAATTGTCCTACATTGTATAAGAAAGAATAATGGTTTGATCCCCATCTCTGGAGAAGAAATTGACTCCACAAGTCGGTACCCTAAGTATCTTGAATCTCTATTTCTGAAATTTTCAACACCTAGAAGGAATTTACAATCTATATTGCTTCAGAGTAGTGCTGAAGGGCCTGCTGTTGAGCCACCCGTTTTGAGTCCTGCACCTTCCCCTTCTAGACCTCAGAGTCCTTTGTTATCTCCGGCACCACCATTTTTCCCGCCAAATTCCATACATTCAAGTTTGCAACCTTCATCTCAGGAAAGCTCTTCGGCAAGTCCGGGCTTTGCTCCAAATGTTCCAGAAGATAAGAAAAGCAATACCCACAGGGCAGTTATTATTGCAGTTGCTGTAACGGCATCAGTGACGTTTCTTGTTGCAGCAATATGCTTTTTGTGCTGTATTAAGCTCTGTCAAAGGCCTTCCAAAGATAGACAAACGGATGAAAAACCTCTCCTTAGCTTCAGTTTAGGTTCTACTCCCAAGTCTTCAGCTTCTGGAGATTCGATTAAGGAAGGGAAGCTCCTGCATCAATCATTTGGCGATTACTCAAGTAACTATACGAAGTCCTCGTCTTCAAATAAGCATGAATTTGCATCTCTTGGAGCTGCTGCTGGGCCCAATAAATCCTCTGTTGAATTCTTCAACTTGTCCAGTAATACTAATTGGGAGCTACCTCCTCCTCCTGGAAGGGCAGTAATCCCTTCTGGTTTGCCTCCTTTAAAGCCTCCTCTTGGCAGGGCAAATCCTCTTCCGCCCGAACCACCATCTTCTTTTAAGATCCCCTCAGGCAGGGCTGGTCCTCATATACCTCCGCCTCCTGTCCCACCTCCCTCTGTGCGACCTTCTGGAAATGCTGCCCGCCCTCCAGGGCCACCTCCTCCTCCGCCACCTGGACCTCCTGGTGGGAAAACAGGTCCTCGTCCACCCCCACCTCCAAAGAGTGTTCTTACTCCGCCTCGACCACCTCCACCAGTAGCAGGTTCAAAGGCAGCTCGACCTTCAAAGAATCCATCTGAAGGAGCCGTGGACGATGATCCAGATGCTCCTAAAGCCAAGTTGAAACCGTTCTTCTGGGATAAGGTTCTAGCTACCCCTGATCAGTCAATGGTCTGGCATCAGATTAAATCAGGGTCTTTCCAGTTCAATGAGGAGATGATAGAAACACTTTTTGGTTATACACCTGTTGATAAGCCCAAACGTGACCAGAAGAAAGAATCTTCCTTGCAAGATCCAAATAAGTGCATTCGGATCATTGATTCAAAAAAGGCACAGAACCTATCAATTCTTTTGCGAGCTTTGAATGTAACTAAGGAAGAAGTTTGTGATGCAATTAATGAAGGGAATGAGCTTCCATCTGAACTTCTTCAGAATCTGCTGAAGATGGCACCAACACAAGAGGAAGAACTAAAGCTGAGGCTTTTCAATGGTGAACTCCCTCAACTTGGCCCCGCTGAGCGGTTTCTTAAAGCCCTTGTTGACATCCCATTTGCTTTCAAAAGGTTGGAAGCATTGCTTTTCATTTGTACTCTTCAAGATGATGTTACCACAACAAAAGACTCTTTTGCCACCTTAGAGATTGCTTGCAAGGAACTCAGAAACAGCAGGCTGTTCCTAAAACTTCTCGAAGCCGTTCTTAAAACTGGAAATCGCATGAATGTTGGTACATTTCGAGGTGGTGCACAAGCATTCAAACTCGACACCCTTTTGAAACTGTCAGATGTGAGAGGAACAGATGGCAAGACCACACTCTTGCACTTTGTTGTTCAAGAGATAATTCGTTCCGAAGGGGTCAAAGCGGGCCGTGCAGCCCGAACAACAACCCAGAGCAGCAGCTTCTCTAGCGTACAATCAGTCGATCTCATTGAGGAAACATCTCAAGATACAGAAGAGCATTATCGTAGCCTAGGTCTCCAGGTTGTTTCAGGTTTGGACAGTGACCTTGAAAATGTGAAGAAAGCAGCTGCTTTAGATGCTGACAGCTTAACTGGAACTGTGTCCAAACTGGGCCAAGCCCTGATGAAGACCCGGAACTTTCTCAACTCTGATTTGAAGAGTCTTGGGGAAAATAATGCATTCTACCAAACGTTGAAAAACTTTGTTCAGAATGCTGAGGTGGACATTAGGTGGCTCCGCGAGGAAGAAAAGAGAATTGTGGATTTAGTGAAGAAGACTGGAGATTACTTCCATGGTAATGCGGGGAAGGATGAAGGCTTACGCTTATTTGTTATAGTCCGGGATTTTCTGATAATGTTGGATAAGGTATGCAAGGAGGTAAAAAATGCACCCAGAAAGCTGCCTGCAGCAACTAAAATGGCTACAATTTCTTCTGATAGCAATCAGACTTCTGCAGCACCAAATTCATCGGATCCCGACCAATCACCATCTCCTGATCTTCGTCAACGGCTTTTTCCGGTTATCATGGACAGGCGAGTGGATAATTCTAGCTCAGACGATGAGAGTTGA 2850 44.98 MKIQGYRGVARRICLTVVVYLICASAATSSDNKETEEVFLSQLADPETGQVDSSLAELLRINCNLDLVHLKEFDNSIDLCVSEQGSGSNGEIHSECWFAKNEQIRRTFSVLRSQLRQIVLHCIRKNNGLIPISGEEIDSTSRYPKYLESLFLKFSTPRRNLQSILLQSSAEGPAVEPPVLSPAPSPSRPQSPLLSPAPPFFPPNSIHSSLQPSSQESSSASPGFAPNVPEDKKSNTHRAVIIAVAVTASVTFLVAAICFLCCIKLCQRPSKDRQTDEKPLLSFSLGSTPKSSASGDSIKEGKLLHQSFGDYSSNYTKSSSSNKHEFASLGAAAGPNKSSVEFFNLSSNTNWELPPPPGRAVIPSGLPPLKPPLGRANPLPPEPPSSFKIPSGRAGPHIPPPPVPPPSVRPSGNAARPPGPPPPPPPGPPGGKTGPRPPPPPKSVLTPPRPPPPVAGSKAARPSKNPSEGAVDDDPDAPKAKLKPFFWDKVLATPDQSMVWHQIKSGSFQFNEEMIETLFGYTPVDKPKRDQKKESSLQDPNKCIRIIDSKKAQNLSILLRALNVTKEEVCDAINEGNELPSELLQNLLKMAPTQEEELKLRLFNGELPQLGPAERFLKALVDIPFAFKRLEALLFICTLQDDVTTTKDSFATLEIACKELRNSRLFLKLLEAVLKTGNRMNVGTFRGGAQAFKLDTLLKLSDVRGTDGKTTLLHFVVQEIIRSEGVKAGRAARTTTQSSSFSSVQSVDLIEETSQDTEEHYRSLGLQVVSGLDSDLENVKKAAALDADSLTGTVSKLGQALMKTRNFLNSDLKSLGENNAFYQTLKNFVQNAEVDIRWLREEEKRIVDLVKKTGDYFHGNAGKDEGLRLFVIVRDFLIMLDKVCKEVKNAPRKLPAATKMATISSDSNQTSAAPNSSDPDQSPSPDLRQRLFPVIMDRRVDNSSSDDES 949
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 462691 467419 + Conep09aG0010600.1 Cone9ag0106 444269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0106 949 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 906 IPR015425 -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 173 232 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 274 299 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 350 480 - -
Cone9ag0106 949 SMART it6_source 472 895 IPR015425 -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 356 387 - -
Cone9ag0106 949 Gene3D Formin, FH2 domain 478 915 IPR042201 -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 177 205 - -
Cone9ag0106 949 PANTHER FORMIN-RELATED 150 948 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone9ag0106 949 MobiDBLite consensus disorder prediction 898 949 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 280 295 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 394 457 - -
Cone9ag0106 949 Pfam Formin Homology 2 Domain 475 880 IPR015425 -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 206 224 - -
Cone9ag0106 949 SUPERFAMILY Formin homology 2 domain (FH2 domain) 421 890 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 900 924 - -
Cone9ag0106 949 MobiDBLite consensus disorder prediction 932 949 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0620 Cone-Chr12:5572509 Cone9ag0106 Cone-Chr9:462691 5.02E-86 dispersed
Cone5ag0041 Cone-Chr5:220249 Cone9ag0106 Cone-Chr9:462691 5.20E-121 dispersed
Cone8ag0638 Cone-Chr8:6278951 Cone9ag0106 Cone-Chr9:462691 5.68E-85 dispersed
Cone9ag0106 Cone-Chr9:462691 Cone9ag1375 Cone-Chr9:10297335 5.19E-114 dispersed
Cone10ag1297 Cone-Chr10:10119840 Cone9ag0106 Cone-Chr9:462691 1.43E-181 wgd
Cone12ag1403 Cone-Chr12:10298466 Cone9ag0106 Cone-Chr9:462691 1.91E-181 wgd
Cone6ag0090 Cone-Chr6:438757 Cone9ag0106 Cone-Chr9:462691 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0106 K28090 - mdm:103448543 895.19