Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0110 ATGGACTCGCACCAGATTTTCAGATTCAGTGTTAGTGGCGCAGAAGTTACATACAACACATCTTCATATCCCACTGTTCCCTCTATACCAAATCGTTTACTCGGATCATTGAAGTTCAACAACGGAAACTCACCCAATTCGCCCATTTTATCTCCCTTCGATTTGAATACTCATACGACACTAAGCGATAGTCAGGAACAGCTTAGCTCCACGGAGAATCTCTCCAGATTCAGCCCTTCTTGTGACTCGCTGATTGAAACCAACAACTACCTAATACACCCTTTGGCTGATAACTCCCAAGTCAACAACCCACAGCTCTACTCAGGTGGGGCCGGTATTTTGGATAATGCTGACCAGAGTCAGTCCCGGATCATAAGTCTTGCATTGCAGCAATTGGAGACAGCTCTTATGGGGCCAGATGGCGAAGAAGAAACCATCAGCAAACCGGAAACTTCTTTCGGGGAAAGTAGCCAGCCACAACAACAAATACTAGGCCAGGGCTCGAGGATGTGGAGCGCCCACAACATTCAACCTCAGACGTCCTTTGTTTCTAGACATAGGCAGCAATCGGCTGAAGAAGCGGTTCATATCGAGAAACGGCAAAAATCAATCTCTGAAGCAGCACCATTACAGGCCGGATTTCCATCAAGCAATAATCTAAAGCAATTGCTTATAGCTTGTGCTAAATCTCTTTCGGAAAACAACATGGAAGATTTCGAAAAGCTGGTTGAAAAGGCTAGAGGGGCCGTATCAATCAGTGGAGAACCAATCCAACGGCTAGGAGCTTACATGGTGGAAGGCTTGGTTGCTAGGAAAGAGGCATCAGGCACGAACATCTACCGTGCCCTGAGGTGTAGAGAGCCACAAAGCTCCGACTTGCTCTCATACATGCACATCTTATACGAAATCTGCCCGTACTTGAAATTCGGTTACATGGCAGCTAATGGTGCTATTGCTGAGGCGTGCAAAAATGAGGACCGAATCCACATAGTAGATTTCCAAATCGCTCAAGGGACACAATGGACCACTCTCCTTCAAGCACTTGCTGCTAGACCCAGAGGGGCCCCATGTGTGAGGATTACGGGGATTGATGATCCCGTTTCGAAATATGCACGGGGTGATGGATTAGAGCTAGTAGGAAAGCGTTTGGCTGCGATTTCGGAAAAATTCAATATCCCGGTAGAGTTTCATGGGGTCCCAGTTTTTGCCCCAGATGTCACTTCCGGAATGCTTGATGTCCGGCCGGGAGAAGCTCTGGCCGTTAACTTTTCTCTCCAATTACATCACACACCGGATGAGAGTGTAGATGTGAATAATCCAAGAGACGGGCTTTTAAGAATGGTGAAGTCTTTATCGCCTAAAGTGGTCACTTTAGTTGAGCAAGAATCAAATGCAAACACGACCCCTTTCTTCTACAGGTTTGTGGAAACTTTAGAGTACTATCTAGCAATGTTCGAGTCGATTGACGTGACTCTTCCGAGGAACAGCAAGAAGAGGATTAAAGTGGAGCAGCATTGTCTGGCTAGGGACATGGTTAATGTTATAGCTTGTGAGGGGAAAGAGAGGGTAGAGAGGCACGAGCTTTTCGGGAAGTGGAAATCTAGGTTGACTATGGCTGGGTTCAGACAGTATCCATTGAGTTCTTACGTGAATTCGGTTATAAGGAGTCTGTTGAGGTGTTACTCGGAACATTACACGCTTGTTGAGAAGGATGGGGCGATGCTCTTGGGATGGAAGGATCGGAATCTGATTTCTGCTTCTGCCTGGAACTAA 1773 46.64 MDSHQIFRFSVSGAEVTYNTSSYPTVPSIPNRLLGSLKFNNGNSPNSPILSPFDLNTHTTLSDSQEQLSSTENLSRFSPSCDSLIETNNYLIHPLADNSQVNNPQLYSGGAGILDNADQSQSRIISLALQQLETALMGPDGEEETISKPETSFGESSQPQQQILGQGSRMWSAHNIQPQTSFVSRHRQQSAEEAVHIEKRQKSISEAAPLQAGFPSSNNLKQLLIACAKSLSENNMEDFEKLVEKARGAVSISGEPIQRLGAYMVEGLVARKEASGTNIYRALRCREPQSSDLLSYMHILYEICPYLKFGYMAANGAIAEACKNEDRIHIVDFQIAQGTQWTTLLQALAARPRGAPCVRITGIDDPVSKYARGDGLELVGKRLAAISEKFNIPVEFHGVPVFAPDVTSGMLDVRPGEALAVNFSLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNANTTPFFYRFVETLEYYLAMFESIDVTLPRNSKKRIKVEQHCLARDMVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKDRNLISASAWN 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 478390 481250 + Conep09aG0011000.1 Cone9ag0110 444273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0110 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 589 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone9ag0110 590 MobiDBLite consensus disorder prediction 150 167 - -
Cone9ag0110 590 MobiDBLite consensus disorder prediction 139 167 - -
Cone9ag0110 590 Pfam GRAS domain family 220 589 IPR005202 -
Cone9ag0110 590 ProSiteProfiles GRAS family profile. 211 590 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0045 Cone-Chr1:251397 Cone9ag0110 Cone-Chr9:478390 8.37E-137 dispersed
Cone7ag1079 Cone-Chr7:8200464 Cone9ag0110 Cone-Chr9:478390 9.84E-55 dispersed
Cone7ag1080 Cone-Chr7:8204358 Cone9ag0110 Cone-Chr9:478390 5.00E-49 dispersed
Cone7ag1483 Cone-Chr7:10404947 Cone9ag0110 Cone-Chr9:478390 4.37E-118 dispersed
Cone9ag0110 Cone-Chr9:478390 Cone9ag0274 Cone-Chr9:1182967 7.02E-51 dispersed
Cone6ag0094 Cone-Chr6:455288 Cone9ag0110 Cone-Chr9:478390 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46764 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0110 K27748 - vvi:100267541 819.69