Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0121 ATGTTTACCAACTCATCGCAGTTTTGTAAACTTCAAAGAAAACGACACCAGAACCTGATGAGTAGGAATCTTATTGCTCTTTTTATCAGGCTATTTGTATTCCTTTTCCTATCTGAATTCTGCAAAGCAGCTGATACCATCACTCGATCCCAATCCCTCACTAATGAGACCCACTTAGTTTCTAAAGGTGGAAACTTTGAACTGGGTTTCTTTAGCCCTAGTAATTCCACTAACTCCTACTTGGGAATCTGGTATAAGAATATCCCAATCAGAACCATTGTCTGGGTCGCTAATCGAATCAACCAGATTAAAACAAAAACCGCCACCTTAACGATAAACAGCACAAGTGATCTTGTTCTTGTTGACCAGAACAACAATATTGTCTGGTCAGCCAAGGCAACTAAACCCATCAAGAATCCAATTCTACAGCTTTTGGATTCTGGAAACCTGGTACTAAGAAATGAAGACGACGAAAATTCTGAAAACTACTTGTGGCAAAGCTTTGATTACCCTTCTGACACCTTATTACCTGGTATGAAGCTTGGATGGGATTTAAAAACCGGCCTCAATCGCCGTTTAACCTCATGGAAGAGCTCAAATGATCCTGCTCCTCAACACTTCACCTGGGAGATGGTCCTTCATAACTATCCGGAAGCTTACGTATGGGAAGGCTCATACATTATTTTCCGAAGCGGTCCATGGAATGGCCTAAGAATAAGTGGGAACCCGGAATTGAAACTCAATCCCATTTTTGGGTACAATTTCGTCTCAAATTCTGATGAGGTATACTACATTTACAACCTGATAAATAAATCCGTCTTATCAAGGGTTTCTCTAAACTATACGAATCATAAACTAGAGCGATACACATGGAATGAAGCGACTGAATCTTGGAAGCTTTATTATTCTGTTCCTAGAGATATCTGTGACAGTTATGAAACCTGTGGTCCAAATGGAAACTGTATCATAGGTGACTCCCCTGTTTGCCAGTGTTTAAGAGGATTCAAGCCCAAGTCACCTGTGAATTGGAATTCTACAGATTGGACTGATGGGTGTATCAGGGATACTCCGTTAAATTGCAGTGAAAGTGATGAAGATGGGTTTGTTTTATTTACGGGATTAAAACTACCTGATACTACACATACTTGGGTTGATAGAAATAAGAGTCTAAAAGAATGTAGGGCATTGTGCTTAGTCAACTGCTCTTGTATGGCTTATACGAACTCAGATATTAGAGGCAAAGGGAGTGGTTGTGCTATGTGGTTTGGTGATTTATATGATGTCAGACAGAGTCCAGATGGTGGGCAAGATCTTTATATTCAGATGCCGGCTTCAATGTTAGGTATACAACTTTTATTTTTCCCCCAAATTAAAGACAATATTTTCTTATATATTACTGGAATTTCTTTTTTCTTTATGAACATGGAATTAGGAAAGGTGAAGGGTATGCGAAATTTAAGATTTCTTGCAGTAATAGCCATTGTTGTAGCTCTTGGGATTTTCTTACTTGGGTACCTCATTTTCAAGAAGAGGAAAAACAGAATAGAGAAAAGAAAGAGAGATGGAATAATAGGCGAGGATAGTGAAAGCCATACTGAGCTAGAGCTCCTGCTGTTCCACTTATCTACAATAGCTAAGGCTACTAATGATTTTTCAGTAGAGAACAAGCTTGGAGAAGGTGGTTTTGGACCAGTGTATAGGGGCATATTAGCTGATGGCCAAGTGATTGCTGTGAAGAGGCTTTCAACAAGTTCGGGTCAAGGGATCAATGAGTTTAAAAATGAAGTTATACTAATTGCAAAACTTCAACACAGAAATCTTGTCAAGCTTCTTGGTTATTGCATTGAAGGGGAAGAGAGATTGTTGATTTACGAACATTTGCCTAATAAAAGCTTAGATTTTTTCATCTTTGATCAAGGTCGAGCTACACTATTAGATTGGCCAAATCGCTTTGATATCATCTGTGGAACTGCTAGGGGGATTCTTTATCTTCATCAAGATTCCAGGTTGAGGGTTATACATAGAGATCTCAAAGCAAGTAATGTCTTACTAGATAGTGAGATGAACCCAAAAATTTCAGACTTTGGCCTGGCTAGAATTTTTGAAGGAAATCAGTCTGAAGGGAAAACAAAAAGAGTGGTTGGTACTTAA 2151 38.82 MFTNSSQFCKLQRKRHQNLMSRNLIALFIRLFVFLFLSEFCKAADTITRSQSLTNETHLVSKGGNFELGFFSPSNSTNSYLGIWYKNIPIRTIVWVANRINQIKTKTATLTINSTSDLVLVDQNNNIVWSAKATKPIKNPILQLLDSGNLVLRNEDDENSENYLWQSFDYPSDTLLPGMKLGWDLKTGLNRRLTSWKSSNDPAPQHFTWEMVLHNYPEAYVWEGSYIIFRSGPWNGLRISGNPELKLNPIFGYNFVSNSDEVYYIYNLINKSVLSRVSLNYTNHKLERYTWNEATESWKLYYSVPRDICDSYETCGPNGNCIIGDSPVCQCLRGFKPKSPVNWNSTDWTDGCIRDTPLNCSESDEDGFVLFTGLKLPDTTHTWVDRNKSLKECRALCLVNCSCMAYTNSDIRGKGSGCAMWFGDLYDVRQSPDGGQDLYIQMPASMLGIQLLFFPQIKDNIFLYITGISFFFMNMELGKVKGMRNLRFLAVIAIVVALGIFLLGYLIFKKRKNRIEKRKRDGIIGEDSESHTELELLLFHLSTIAKATNDFSVENKLGEGGFGPVYRGILADGQVIAVKRLSTSSGQGINEFKNEVILIAKLQHRNLVKLLGYCIEGEERLLIYEHLPNKSLDFFIFDQGRATLLDWPNRFDIICGTARGILYLHQDSRLRVIHRDLKASNVLLDSEMNPKISDFGLARIFEGNQSEGKTKRVVGT 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 528827 532607 - Conep09aG0012100.1 Cone9ag0121 444284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0121 716 PIRSF SRK 16 716 IPR024171 GO:0004674(InterPro)
Cone9ag0121 716 ProSiteProfiles Bulb-type lectin domain profile. 44 165 IPR001480 -
Cone9ag0121 716 ProSiteProfiles Protein kinase domain profile. 551 716 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0121 716 Pfam S-locus glycoprotein domain 229 339 IPR000858 GO:0048544(InterPro)
Cone9ag0121 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 627 716 - -
Cone9ag0121 716 Gene3D Phosphorylase Kinase; domain 1 512 626 - -
Cone9ag0121 716 SMART ntp_6 363 442 IPR003609 -
Cone9ag0121 716 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 37 716 - -
Cone9ag0121 716 ProSiteProfiles EGF-like domain profile. 305 341 IPR000742 -
Cone9ag0121 716 SMART blect_4 50 171 IPR001480 -
Cone9ag0121 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 40 168 - -
Cone9ag0121 716 SUPERFAMILY Protein kinase-like (PK-like) 531 716 IPR011009 -
Cone9ag0121 716 Pfam Protein kinase domain 552 716 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0121 716 ProSiteProfiles PAN/Apple domain profile. 360 443 IPR003609 -
Cone9ag0121 716 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 202 IPR036426 -
Cone9ag0121 716 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 515 626 - -
Cone9ag0121 716 SMART serkin_6 551 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0121 716 Pfam PAN-like domain 360 428 IPR003609 -
Cone9ag0121 716 Gene3D - 39 168 IPR036426 -
Cone9ag0121 716 Gene3D Transferase(Phosphotransferase) domain 1 627 716 - -
Cone9ag0121 716 CDD B_lectin 50 171 IPR001480 -
Cone9ag0121 716 Pfam D-mannose binding lectin 92 197 IPR001480 -
Cone9ag0121 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0121 716 CDD PAN_AP_plant 356 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0121 Cone-Chr9:528827 Cone9ag0123 Cone-Chr9:537676 8.45E-241 dispersed
Cone9ag0121 Cone-Chr9:528827 Cone9ag0122 Cone-Chr9:534273 0 tandem
Cone10ag1305 Cone-Chr10:10183519 Cone9ag0121 Cone-Chr9:528827 2.75E-75 wgd
Cone12ag1413 Cone-Chr12:10327058 Cone9ag0121 Cone-Chr9:528827 4.85E-78 wgd
Cone14ag1104 Cone-Chr14:9211550 Cone9ag0121 Cone-Chr9:528827 6.82E-141 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone9ag0121 Cone-Chr9:528827 2.57E-181 wgd
Cone3ag1372 Cone-Chr3:32704170 Cone9ag0121 Cone-Chr9:528827 3.70E-53 wgd
Cone6ag0103 Cone-Chr6:501150 Cone9ag0121 Cone-Chr9:528827 2.50E-238 wgd
Cone9ag0121 Cone-Chr9:528827 Cone9ag1057 Cone-Chr9:5762145 5.82E-214 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83153 PF00330 Aconitase 4.60E-64 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0121 - - - 0.0