Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0122 ATGAAGCTGAGGCTACTTTTATTCCTTTCCCTATCTGAATTTTGCAAAGCAGCTGATACCATCACTCAATTCCAATCCCTCACTAATGAGACTCTAAAGGTGGAAACTTTGAACTGGGTTTCTTTAGCCCTAAATATCCCAATCAGAACCATTGTTTGGGTGGCTAATCCAATCAATCCGATCAAAACCAAAACAGCCACTTTAACGATAAACAGCGCAAGCGATCTTGTTCTCGTTGACCAGAACAACGATTTTGTTTGGTCAGCCAGGGCAACTAAACCCATCAATAATCCAATTCTACAGCTTTTAGATTCGGGAAACCTTGTACTAAGAAATGAAGAAGACGGAAATTCCGAAAAATTGAAATCCAATGCCATTTTTTGGTTCAGTTTCGTCTCAAATTCTGATGAGGTATACTACATTTACGGCCTGATAAATAAATCTGTCTTATCAAGGGCGTTTCTAAATTACACGAATCATAAACTAGAGCGGTACACTTGGAATGAAGTGACTGAATCTTGGAAGCTTTATTATTATGTTCCTAGAGATTTCTGTGACAATTATGATACCTGTGGTCCCAACGGAAACTGTATTATTGGTGACTCCCCAGTTTGCCAGTGTTTAAGAGGATTCAAGCCCAAGTCACTTGTGAATTGGAATTCTACAGATTGGTCTGATGGGTGTGTAAGGGATACTCCGTTGAATTGCAGTGAAAGTGATGGAGATGGGTTTGTTTTATTTACGGGATTAAAATTACCCGATACTACACATACTTGGGTTGATAGAAATATGGGTGTAAAAGAATGTCGGGCATTGTGCTTGGCCAATTGCTCTTGTATGGCTTATGCGAACTCAGATATTCAAGGCAAAGGGAGTGGTTGTGCTATGTGGTTTGGTGATTTCTATGATGTTAGACAGAATCCAGATGGTAGGCAAGATCTCTATATTCGGATGCCGGCTTCAATGCTAGGAAAGGGGGAGGGAAAGCGGAATTTAAGATTTCTTGCAGTAATAGCCATTGTTGTAGCTCTTGGGATTCTCTTACTTGGGTACGTCATTTTCAAGCAGAGGAAAAACAGAATAGAGGGAATAATAGGTGTGGGTAGTGGAAGTTATACCGAACTAGAGCTCCCACTGTTCCACTTATCTGCAATAGCTATGGCTACTAATGATTTTTCAGTAGAGAACAAGCTTGGAGAAGGTGGTTTTGGACCAGTGTATTGGGGTATATTAGCTGATGGCCAAGTGATTGCTGTGAAGAGGCTTTCAACAAGTTCGGGTCAAGGGATCAATGAGTTTAAAAATGAAGTTATACTAATTGCAAAACTTCAACACAGAAATCTTGTCAAGCTTCTTGGTTATTGCATTGAAGGGGAAGAGAGATTGTTGATTTACGAACATTTGCCTAATAAAAGCTTAGATCTTTTCATCTTTGATCAAGGTCGAGCTACACTATTAGATTGGCCCAAACGCTTTGATATCATCTGTGGAACTGCTAGGGGGATTCTTTATCTTCATCAAGATTCCAGGTTGAGAATTATACATAGAGATCTCAAAGCAAGTAATGTCTTACTAGATAATGAGATGAACCCAAAAATTTCAGACTTTGGCCTGGCTAGAATTTTTGAAGGAAATCAGTCTGAAGGGAAAACAAAAAGAGTGGTTGGTACTTATGGTTATATGTCACCAGAATATGGATTTCATGGGCTATTCTCGACTAAATCAGATGTTTTTAGCTTTGGTGTATTAATATTGGAGATCGTTAGTGGAAAGAAAAGTACCGAGTTTAATCATCCCAACCACAGCTTTAATCTCTTAGGACATGCATGGATATTGTGGAAAGAAAACAGACAAAAAGAGTTGATTGATACTTGCATAAGAGATTCTTGCACGGAATCAATTTCCCGGTGCATGCATGTCGGTCTATTATGTGTACAGCATCGACCAGAAGATAGACCAAGCATGTATGATGTGGTTTTGATGTTGGGTAGTGAGACAGAGTTGCCTGAGCCCAATAAACCCGGTTTCTTTGTAGAATATGATTCGGTTAAACCAGATTCTTCTTCTAATAGACCTTATGAATTGTCTTCAGCTGCGGGACTAACCATAACAGAGATGGATGGTCGATAA 2130 39.39 MKLRLLLFLSLSEFCKAADTITQFQSLTNETLKVETLNWVSLALNIPIRTIVWVANPINPIKTKTATLTINSASDLVLVDQNNDFVWSARATKPINNPILQLLDSGNLVLRNEEDGNSEKLKSNAIFWFSFVSNSDEVYYIYGLINKSVLSRAFLNYTNHKLERYTWNEVTESWKLYYYVPRDFCDNYDTCGPNGNCIIGDSPVCQCLRGFKPKSLVNWNSTDWSDGCVRDTPLNCSESDGDGFVLFTGLKLPDTTHTWVDRNMGVKECRALCLANCSCMAYANSDIQGKGSGCAMWFGDFYDVRQNPDGRQDLYIRMPASMLGKGEGKRNLRFLAVIAIVVALGILLLGYVIFKQRKNRIEGIIGVGSGSYTELELPLFHLSAIAMATNDFSVENKLGEGGFGPVYWGILADGQVIAVKRLSTSSGQGINEFKNEVILIAKLQHRNLVKLLGYCIEGEERLLIYEHLPNKSLDLFIFDQGRATLLDWPKRFDIICGTARGILYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARIFEGNQSEGKTKRVVGTYGYMSPEYGFHGLFSTKSDVFSFGVLILEIVSGKKSTEFNHPNHSFNLLGHAWILWKENRQKELIDTCIRDSCTESISRCMHVGLLCVQHRPEDRPSMYDVVLMLGSETELPEPNKPGFFVEYDSVKPDSSSNRPYELSSAAGLTITEMDGR 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 534273 537264 - Conep09aG0012200.1 Cone9ag0122 444285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0122 709 PIRSF SRK 4 137 IPR024171 GO:0004674(InterPro)
Cone9ag0122 709 PIRSF SRK 114 709 IPR024171 GO:0004674(InterPro)
Cone9ag0122 709 Pfam PAN-like domain 236 304 IPR003609 -
Cone9ag0122 709 SMART blect_4 12 127 IPR001480 -
Cone9ag0122 709 CDD PAN_AP_plant 232 319 - -
Cone9ag0122 709 SMART serkin_6 392 662 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0122 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0122 709 Gene3D Phosphorylase Kinase; domain 1 366 467 - -
Cone9ag0122 709 Gene3D Transferase(Phosphotransferase) domain 1 468 672 - -
Cone9ag0122 709 SMART ntp_6 239 318 IPR003609 -
Cone9ag0122 709 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 129 674 - -
Cone9ag0122 709 ProSiteProfiles PAN/Apple domain profile. 236 319 IPR003609 -
Cone9ag0122 709 Pfam D-mannose binding lectin 50 137 IPR001480 -
Cone9ag0122 709 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 670 - -
Cone9ag0122 709 ProSiteProfiles Protein kinase domain profile. 392 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0122 709 CDD STKc_IRAK 398 662 - -
Cone9ag0122 709 Pfam S-locus glycoprotein domain 121 215 IPR000858 GO:0048544(InterPro)
Cone9ag0122 709 SUPERFAMILY Protein kinase-like (PK-like) 371 662 IPR011009 -
Cone9ag0122 709 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 364 467 - -
Cone9ag0122 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 142 IPR036426 -
Cone9ag0122 709 Pfam Protein tyrosine and serine/threonine kinase 394 659 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0122 709 ProSiteProfiles Bulb-type lectin domain profile. 12 123 IPR001480 -
Cone9ag0122 709 Gene3D - 15 131 IPR036426 -
Cone9ag0122 709 Pfam Domain of unknown function (DUF3403) 665 709 IPR021820 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0122 Cone-Chr9:534273 Cone9ag1057 Cone-Chr9:5762145 1.24E-202 dispersed
Cone9ag0121 Cone-Chr9:528827 Cone9ag0122 Cone-Chr9:534273 0 tandem
Cone9ag0122 Cone-Chr9:534273 Cone9ag0123 Cone-Chr9:537676 1.64E-225 tandem
Cone10ag1306 Cone-Chr10:10191521 Cone9ag0122 Cone-Chr9:534273 3.28E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83154 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0122 - - - 0.0