Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0144 ATGACGGAAATGAAACTAGTGAAGTTAGTATGTATACTTCTTTCTGTTCTTTTGTCTATCAGTTTAGGATCCTTTGCCTCATTCACTCCCACTGATAACTACTTAATTTCTTGTGGTTCTTCACAAAATATCACCTTCCAAGGTCGAACTTTCGTTCCCGATTCAGACCTTTTTTCTCTCAAAAAAGGAAGTTCTAGTATTGCCAGTTCCAACACTAGTTTTCCATCTCCCATTTACCAATTTGCTCGTATTTTCACTGGCTTAGCCTCTTACAAATTCGATATTCGGAGTCCAGGACGGCATTGGGTCCGCCTCTATTTCTACCCTCTTTTGAAATCAGGCCAAAATTTGACCTCTTCTTCACTAACAGTAGTCACCGATCATTTTGTGCTCTTGAACAACTTCACTTTCAAGAACCACAATGGTTCTTACATGTTCAAGGAATATGCAATCAATATCACTTCTGACTCTTTGACCCTTACATTCATCCCTTCAAATAATTCAGTCTCATTCATTAATGCAATTGAAGTCGTCTCTATGCCCGATGAAGTTCTTCCCGACCAAGCATTGGCTTTGAACCCATCTGCCCCTTTTGACGGCCTTTCTCAACTTGCTCTAGAAACTGTTTACCGGCTAAATATGGGGGGCCCACTTGTCAGCCCACAAAACGATACCCTTGGAAGAACTTGGGAGAATGATTTTAAGTACCTTCATGTGAACAGTTCTGCTGTGAATGTTTCAGTCAACCCAGCAAATATTAAATACCCTGCAGCTGTTACACCAGAAACTGCACCAAATTGGGTATATGCAACTGCTGATGCCATGGGAGATGCAGATGTACAGAATGTGAACTTCAATTTAACATGGGTTTTCTCTGTCGATCCAAATTTCTATTACTTTGTTCGAGTGCATTTTTGTGATATAGTGAGCAAATCTCTAAACACCCTAGTTTTCAATCTTTATATTAATTTGGATAATGCTCTTGGAAGTTTCGACCTTTCATCTCTGACTGGTGATTTGGGTGTGCCGTACTATAAAGACTTTGTTTCCAACTTGGCAAATTTGGATACTTTGACAGTTAGTGTGGGGCCCGATACAATGGCTGACATCACAAATGCGACTTTAAACGGGCTGGAGATTATGAAGATCAGCAATCATGTGGGGAGTTTGGATGGTGTATCATCAGTTGATGGGCTTCTTCCTGAAGAACTTTCAAAGAAGAGTAAGATAGCAATAATAATCGGTTCTGCTGTTGGAGCTGTAGTTGCTGTTTTATTACTCGGTCTGTGTTGTTACTGCTTGATTGGCTACAAGGCGAAGAGTACAAGCCAAGGGAATTCATGGCTGCCTTTGCCCTTACATGGAAACTCTCTGACCATGACAAAAATGTCAACTACTTCCCAGAAGAGTGGAACAGCAAGTTGTATATCATTGGCTTCCTCCAATCTCGGCCGGGTATTCACATTTCAAGAAATCATTGACGCCACAAATAAGTTCAATGAAAATCTACTACTTGGTGTTGGTGGATTTGGCCGGGTTTATAAGGGAACCCTTGAAGATGGGACAAAAGTAGCTGTTAAAAGAGGAAACCCAAGATCCGAACAGGGTCTTGCTGAATTCCGAACAGAAATTGAAATGCTATCCAAGCTCAGACATCGCCATCTCGTTTCTCTTATTGGCTACTGTGATGAACGGTCAGAGATGATTCTTGTCTATGAATATATGGCAAATGGGCCTCTTAGGAGTCACTTGTACGGAACAGATTTGCCATCTCTTTCATGGAAGCAAAGAATTGAAATTTGCATTGGAGCTGCTCGTGGGCTTCATTATCTTCACACGGGTGCATCTCAAAGCATTATTCACAGAGATGTGAAGACAACCAATATTCTCTTGGATGAGAATTTCGTAGCAAAAGTTGCTGATTTTGGTCTTTCTAAAACAGGTCCATCTCTTGATCAGACTCATGTCAGTACTGCTGTTAAGGGAAGTTTTGGTTACCTTGACCCAGAATATTTCCGAAGGCAACAGCTTACGGAGAAATCGGATGTATATTCATTTGGAGTTGTTCTAATGGAAGTTCTATGCACAAGACCGGCTTTAAACCCTGTTCTTCCAAGGGAGCAAGTGAATATAGCAGAATGGGCCATGGCATGGCAAAAGAAGGGAATGTTGGACCAAATCATGGACCCGAATCTTGTGGGGAAGGTTAATCCAGCTTCTCTTAAGAAATTTGGAGAGACAGCTGAGAAGTGTTTAGCTGAGCATGGGGTTGATAGGCCTTCAATGGGTGATGTATTATGGAATCTGGAATATGCTCTTCAGCTCGAGGAAACTTCTTCTCAACTATTGGAGCCTGAAGGTAACAGCACAAATCATATTCCAACTATCCAGTTGGCTACCTTAGAGCCGTTTGATAATAGTGTGAGCATGATTGATGCAAGAAACTCTGGTACTGATGATGATACAGAAGATGCTGCAACAAGTGCAGTGTTTTCTCAGCTAGTGAATCCAAGGGGAAGATGA 2523 41.46 MTEMKLVKLVCILLSVLLSISLGSFASFTPTDNYLISCGSSQNITFQGRTFVPDSDLFSLKKGSSSIASSNTSFPSPIYQFARIFTGLASYKFDIRSPGRHWVRLYFYPLLKSGQNLTSSSLTVVTDHFVLLNNFTFKNHNGSYMFKEYAINITSDSLTLTFIPSNNSVSFINAIEVVSMPDEVLPDQALALNPSAPFDGLSQLALETVYRLNMGGPLVSPQNDTLGRTWENDFKYLHVNSSAVNVSVNPANIKYPAAVTPETAPNWVYATADAMGDADVQNVNFNLTWVFSVDPNFYYFVRVHFCDIVSKSLNTLVFNLYINLDNALGSFDLSSLTGDLGVPYYKDFVSNLANLDTLTVSVGPDTMADITNATLNGLEIMKISNHVGSLDGVSSVDGLLPEELSKKSKIAIIIGSAVGAVVAVLLLGLCCYCLIGYKAKSTSQGNSWLPLPLHGNSLTMTKMSTTSQKSGTASCISLASSNLGRVFTFQEIIDATNKFNENLLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPSLSWKQRIEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMAWQKKGMLDQIMDPNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSQLLEPEGNSTNHIPTIQLATLEPFDNSVSMIDARNSGTDDDTEDAATSAVFSQLVNPRGR 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 624888 627565 - Conep09aG0014500.1 Cone9ag0144 444307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0144 840 Gene3D - 33 181 - -
Cone9ag0144 840 Gene3D - 204 385 - -
Cone9ag0144 840 Pfam Malectin-like domain 36 383 IPR024788 -
Cone9ag0144 840 Gene3D Transferase(Phosphotransferase) domain 1 575 790 - -
Cone9ag0144 840 Gene3D Phosphorylase Kinase; domain 1 458 574 - -
Cone9ag0144 840 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524(InterPro)
Cone9ag0144 840 FunFam Receptor-like protein kinase FERONIA 575 789 - -
Cone9ag0144 840 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0144 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0144 840 PANTHER OS03G0124300 PROTEIN-RELATED 2 431 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cone9ag0144 840 SMART serkin_6 499 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0144 840 FunFam Receptor-like protein kinase FERONIA 205 385 - -
Cone9ag0144 840 CDD STKc_IRAK 505 770 - -
Cone9ag0144 840 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Cone9ag0144 840 FunFam Putative receptor-like protein kinase 33 181 - -
Cone9ag0144 840 FunFam receptor-like protein kinase FERONIA 461 574 - -
Cone9ag0144 840 Pfam Protein tyrosine and serine/threonine kinase 504 764 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1326 Cone-Chr1:56415284 Cone9ag0144 Cone-Chr9:624888 2.68E-216 dispersed
Cone8ag0871 Cone-Chr8:8581323 Cone9ag0144 Cone-Chr9:624888 3.30E-75 dispersed
Cone8ag1216 Cone-Chr8:10306930 Cone9ag0144 Cone-Chr9:624888 6.74E-273 dispersed
Cone9ag0144 Cone-Chr9:624888 Cone9ag1353 Cone-Chr9:10139305 5.83E-208 dispersed
Cone6ag0119 Cone-Chr6:572346 Cone9ag0144 Cone-Chr9:624888 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83156 PF12490 BCAS3 3.30E-65 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0144 - - - 0.0