Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0184 ATGACCGGCAGAGAAATCATCCACAAGATGAAGGAAAAAGTCATGGGATCATCAGATACTGATTCCGGAAAAGGAAAGAGCAAGGTGTCGAAGCACGTAACACATGGATTCCACTTGGTGAAGGGAAAATCCCACCATGCCATGGAAGACTACGTAGTTGCTCAGTTTAAGCAAGTCGATGACCATGAGCTTGGTTTATTCGCAATATTTGATGGCCATTTGAGCCACGATATTCCTGACTACTTACGGGCTCATTTGTTCGATAACATTATCAATGAGCCCTCCTTTTGGACCAAGCCGGAGATTGCAGTCAGGGAAGCATATGGTAGAACAGATGCGTACATTTTGGAGAAGGCAGTCGATTTGGGTAAAGGGGGTTCAACTGCAGTTACGGCAATACTTATCGACTGTCAAAAACTGGTAGTTGCAAATGTCGGTGATTCCCGGGCAGTTATCTGCCGAAACGGTCATGCCATACAGTTATCGGTTGACCACGAGCCGGACAGGGAAAGAGAAATCATTGAGAACAAAGGTGGTTTTGTCTCGAACTTTCCTGGAGACGTTCCTCGTGTTGATGGGCAATTAGCTGTAGCAAGGGCATTTGGCGATAAGAGCTTGAAGAAGCATCTAAGCTCAGAACCTCATGTAATAGTGGAATCCATAGATGAAGCGACAGAGTTCATTATCTTGGCAAGTGATGGATTATGGAAGGTAATGTCGAATCAAGAAGCCGTAGATTCGATCAAACAAATCAAAGACGCTCGTGCAGCGGCTAAGCACTTGACTGAAGAAGCTCTTATCAGGAAGAGCACTGATGATATTTCCTGTGTAGTTGTAAGACTCCATTAA 849 44.76 MTGREIIHKMKEKVMGSSDTDSGKGKSKVSKHVTHGFHLVKGKSHHAMEDYVVAQFKQVDDHELGLFAIFDGHLSHDIPDYLRAHLFDNIINEPSFWTKPEIAVREAYGRTDAYILEKAVDLGKGGSTAVTAILIDCQKLVVANVGDSRAVICRNGHAIQLSVDHEPDREREIIENKGGFVSNFPGDVPRVDGQLAVARAFGDKSLKKHLSSEPHVIVESIDEATEFIILASDGLWKVMSNQEAVDSIKQIKDARAAAKHLTEEALIRKSTDDISCVVVRLH 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 805263 807161 - Conep09aG0018600.1 Cone9ag0184 444347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0184 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Cone9ag0184 282 Gene3D - 28 282 IPR036457 -
Cone9ag0184 282 SMART PP2C_4 23 279 IPR001932 -
Cone9ag0184 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
Cone9ag0184 282 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Cone9ag0184 282 CDD PP2Cc 41 281 IPR001932 -
Cone9ag0184 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Cone9ag0184 282 PANTHER PROTEIN PHOSPHATASE 28 279 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0184 Cone-Chr9:805263 Cone9ag0849 Cone-Chr9:4151370 6.46E-33 dispersed
Cone6ag0160 Cone-Chr6:787673 Cone9ag0184 Cone-Chr9:805263 2.91E-190 wgd
Cone8ag1519 Cone-Chr8:11461738 Cone9ag0184 Cone-Chr9:805263 5.89E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0184 K17506 - mdm:103448709 450.669