Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0187 ATGGCTGAGGCAGAGAGTATAGTAGAGATTACTGGATCGAGGTTTAGTTCATTGGAACTTATTGGCAGAGGATCTTTTGGTGATGTCTACAAGGGGCTTGATAAGGAGCTTAACAAAGAGGTTGCTATAAAAGTTATTGATTTGGAAGAAGCGGAGGATGAAATTGAGGACATACAGAAAGAAATTTCTGTTTTGTCACAATGTAGATGTCCCTATATTACAGAGTACTATGGTTCTCGTCTTCACCAGACTAAATTATGGATGATAATGGAATACATGGCTGGTGGCTCAGTAGCTGACCTGCTTCAATCCGGACCACCACTGGATGAAATGTCTATTGCTTGCATTCTACGCGACTTGCTGCGTGCAATTGATTATTTGCATAGTGAAGGAAAAATTCACAGGGATATTAAAGCGGCCAATATATTGTTGAGTGAACAGGGTGATGTTAAGGTTGCAGATTTTGGCGTTTCTGCACAATTAACGAGGACAATATCCAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCCCCAGAGGTAATTCAAAATTCAGATGGGTACGATGAAAAGGCAGATATCTGGTCCCTTGGAATCACAGCTATTGAGATGGCAAAAGGTGAACCTCCACTTGCTGATCTTCATCCAATGAGAGTTCTTTTTATAATTCCTCGAGAAAATCCACCTCAGTTAGATGAGCATTTCTCTCGTCCTATGAAAGAATTTGTGTCGCTGTGTCTGAAGAAAGTACCTGCTGAGAGACCAAGTGCCAAGGAGCTTTTAAAGCACCGATTTATTAAGAACGCCAAGAAGAGTCCCAGGCTTCTGGAGAGAATAAGTGAGCGTCCAAAGTATCAAGTAAAGGAAGATGTGGAAGAATCCAAAAATGGTCCTAGGGATATTGGGGTGATGTGTGATACCGTGAAAGTCTCCAGGAATTTAAAAGAAGAGAGTGCCCAAGCCAGTAATCAGGGCAGAACCATAAAGAATGGAGGATGGGACTTCAGCATTGGTGCATCTCACAGTACAGGTACTATTCGAAGTGTTAAACCACCTCAGATTAGGGAAAAGAAGTCAGCACTTTCTTCTGGTCAAGCTCCTCCGTTAAGAATTTCAGACAGAGGCAACCCACGTGAAGATGACTTCTCAAAATATGCTAGAGATTCATTTGTTACAGAACACCTGGAGAATAATAGTGACGATGAAGAGTTAAGTGGTTCAGGAACTGTTGTTATCCGATCCCCTAGAGGGTATTTATCATCTAGTCAATATCATCAGCAAAGCACCACGTCCGAGAGCACATATGCATCTTATGAAGACACTTCTTCTAGTGGTACTGCTGTCTTTCGAAACCAACATGATGATTTGGGTTCTCCTCAGACGCCAAGATCCAGATTGGGAATTCAAGAGAGGACTTCAAGTGCCTCACTTGAAGAAGAAAGTGCAATAAATCTGGCAGAGGCAAAGGCTGTGTTGCAAGCAGGATTAAGAAAAGCAAATGTTAGAGAAAGGTCTGCACTTGGCAAGGTTAGCAACAAAGGGAAAGAAGATAGAAAAAGAGAGCAAACAACAAGTAGCTCTGATTCTTCCAGATATTCTCGTGAATACTATGACGCACCAAAAGCATTGACAATATCACAAACAAGTGATGATGAAGAAATAGCTAAAGTAACTGCATCCTCTGCTCCATTATCAATTTTGCTTATCCCGTCCTTGAAACAGGTTGTAGCTGATGACTCAGAAGGACCAGTTGTTAATTCCGTTGCTAATTCTCTTATAAATATGGAGCAGAAAAATCCAGGATCTTGTGAAATTTTTATATGCAAATTGCTTCAGCAATTGGGAAGTTCTAATGAATCATCATTGAAGGATTTGCATGCGCTAGCAGCTCATATTTTTCCCAAAGGTCAGCCAGTTTCTGAAGAAACAAATGTGAATGCAGATGCTGATAGCAATAAAAAGCAACAGAAAACAGAAACTAATTCAAATTCCAATTTGAGCCCTCTTGCTAGGTTTCTGCTCTCGAGATGGCAAGGACAAGTATCAAGGGATCTCAACCCAGCTTAG 2070 41.16 MAEAESIVEITGSRFSSLELIGRGSFGDVYKGLDKELNKEVAIKVIDLEEAEDEIEDIQKEISVLSQCRCPYITEYYGSRLHQTKLWMIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLRAIDYLHSEGKIHRDIKAANILLSEQGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYDEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLKHRFIKNAKKSPRLLERISERPKYQVKEDVEESKNGPRDIGVMCDTVKVSRNLKEESAQASNQGRTIKNGGWDFSIGASHSTGTIRSVKPPQIREKKSALSSGQAPPLRISDRGNPREDDFSKYARDSFVTEHLENNSDDEELSGSGTVVIRSPRGYLSSSQYHQQSTTSESTYASYEDTSSSGTAVFRNQHDDLGSPQTPRSRLGIQERTSSASLEEESAINLAEAKAVLQAGLRKANVRERSALGKVSNKGKEDRKREQTTSSSDSSRYSREYYDAPKALTISQTSDDEEIAKVTASSAPLSILLIPSLKQVVADDSEGPVVNSVANSLINMEQKNPGSCEIFICKLLQQLGSSNESSLKDLHALAAHIFPKGQPVSEETNVNADADSNKKQQKTETNSNSNLSPLARFLLSRWQGQVSRDLNPA 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 814399 819310 + Conep09aG0018900.1 Cone9ag0187 444350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0187 689 MobiDBLite consensus disorder prediction 419 481 - -
Cone9ag0187 689 CDD STKc_MST3_like 13 287 - -
Cone9ag0187 689 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Cone9ag0187 689 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Cone9ag0187 689 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 14 652 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Cone9ag0187 689 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0187 689 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0187 689 MobiDBLite consensus disorder prediction 506 534 - -
Cone9ag0187 689 MobiDBLite consensus disorder prediction 506 526 - -
Cone9ag0187 689 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Cone9ag0187 689 Coils Coil 34 68 - -
Cone9ag0187 689 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0187 689 MobiDBLite consensus disorder prediction 342 383 - -
Cone9ag0187 689 SUPERFAMILY Protein kinase-like (PK-like) 12 268 IPR011009 -
Cone9ag0187 689 MobiDBLite consensus disorder prediction 640 666 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0549 Cone-Chr8:4082559 Cone9ag0187 Cone-Chr9:814399 5.29E-61 dispersed
Cone9ag0187 Cone-Chr9:814399 Cone9ag1239 Cone-Chr9:9076150 4.12E-51 dispersed
Cone14ag1056 Cone-Chr14:8907549 Cone9ag0187 Cone-Chr9:814399 1.36E-305 wgd
Cone6ag0161 Cone-Chr6:791788 Cone9ag0187 Cone-Chr9:814399 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83159 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0187 K08838 - vvi:100258981 937.947