Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0191 | ATGGCTCCTAGAGATAGATCCGGCAACGGTGGGGGATCCAACAACCCAAACCTGGTTCCAGCCTCTATGGAGATCCGATACAGAGGAGTGAGAAAGAGGCCGTGGGGTCGTTACGCGGCGGAGATCCGTGATCCTGGCAAGAAGACCCGCGTTTGGCTCGGCACATTTGATACGGCTGAGGATGCGGCGCGTGCTTACGATGCGGCGGCGCGTGAGTTCAGAGGCCCTAAGGCTAAGACTAACTTTCCCACGACGTCAGAACTCATCATCGTCAATAATCAGAAGAATACGAATAACAACTACTCGCCGCGTAGCAGTCCGAGCCAGAGCAGCACGGTTGATTCGTCTTCACCGCCGCCGGTTCCGACACCGTTGGATCTTACTCTTAGCTCACTATCTGGGGGCGCCGCCACCGCCTCCGGTGGGTTTCCCGCCAGTTGCTTCCCTCACTACGGCGGGGTAACAACGCTTCCGATGGCTCGTCCCGTGTTTTTCTTCGACGCTTTTGCACGCGCGGAGCTGAAGAATTCCAGTCTTCGAGAGATCTCTAGGTTCGATCGAGCGGTGGTTGGTGGTTTCAATAAGATCGCAACCGGTGTGACCCAGAGCGACTCAGATTCATCATCCGTCGTTGATTTCGAAAGTACCCATAACGAGAGACCGTTAAATCTTGACCTCAACCTTCCCCCACCGGGAGTTGCTTAA | 705 | 55.46 | MAPRDRSGNGGGSNNPNLVPASMEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEDAARAYDAAAREFRGPKAKTNFPTTSELIIVNNQKNTNNNYSPRSSPSQSSTVDSSSPPPVPTPLDLTLSSLSGGAATASGGFPASCFPHYGGVTTLPMARPVFFFDAFARAELKNSSLREISRFDRAVVGGFNKIATGVTQSDSDSSSVVDFESTHNERPLNLDLNLPPPGVA | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 828398 | 829539 | - | Conep09aG0019300.1 | Cone9ag0191 | 444354 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0191 | 234 | FunFam | Ethylene-responsive transcription factor 2 | 26 | 84 | - | - | |
Cone9ag0191 | 234 | MobiDBLite | consensus disorder prediction | 95 | 116 | - | - | |
Cone9ag0191 | 234 | PRINTS | Ethylene responsive element binding protein signature | 49 | 65 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | PRINTS | Ethylene responsive element binding protein signature | 27 | 38 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | ProSiteProfiles | AP2/ERF domain profile. | 26 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | Pfam | AP2 domain | 26 | 75 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | SMART | rav1_2 | 26 | 89 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | MobiDBLite | consensus disorder prediction | 95 | 129 | - | - | |
Cone9ag0191 | 234 | Gene3D | AP2/ERF domain | 25 | 85 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 13 | 209 | - | - | |
Cone9ag0191 | 234 | SUPERFAMILY | DNA-binding domain | 26 | 84 | IPR016177 | GO:0003677(InterPro) | |
Cone9ag0191 | 234 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cone9ag0191 | 234 | MobiDBLite | consensus disorder prediction | 200 | 234 | - | - | |
Cone9ag0191 | 234 | CDD | AP2 | 26 | 85 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0191 | 234 | MobiDBLite | consensus disorder prediction | 200 | 222 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag1554 | Cone-Chr8:11648898 | Cone9ag0191 | Cone-Chr9:828398 | 3.31E-32 | dispersed | |
Cone9ag0191 | Cone-Chr9:828398 | Cone9ag1000 | Cone-Chr9:5176381 | 1.52E-28 | dispersed | |
Cone1ag0177 | Cone-Chr1:1000884 | Cone9ag0191 | Cone-Chr9:828398 | 3.79E-39 | wgd | |
Cone12ag1475 | Cone-Chr12:10549137 | Cone9ag0191 | Cone-Chr9:828398 | 2.05E-35 | wgd | |
Cone6ag0166 | Cone-Chr6:810460 | Cone9ag0191 | Cone-Chr9:828398 | 2.78E-127 | wgd | |
Cone6ag0997 | Cone-Chr6:5491872 | Cone9ag0191 | Cone-Chr9:828398 | 1.64E-34 | wgd | |
Cone8ag1521 | Cone-Chr8:11472003 | Cone9ag0191 | Cone-Chr9:828398 | 9.33E-35 | wgd | |
Cone9ag0191 | Cone-Chr9:828398 | Cone9ag0999 | Cone-Chr9:5159303 | 8.74E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46770 | PF00931 | NB-ARC | 3.30E-37 | CL0023 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0191 | K09286 | - | mdm:103427330 | 159.844 |