Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0247 ATGGGATGTTCTCTTTTAGCAATCTTGATCTTTCTTTTTCTCACGATTCTTCCTACTTTAATCCTAGCGGATTGTACGTGTGACGAGTCGGAAGACGAGATCGACAAGTCCGAAGCTCGAAAGTACAAGATCATAGCAATAGTTACGATCTTAACGGGAAGTACGACAGGAGTTTTTATTCCGCTGTTGGGTAAATTCATTCCGGCTTTGAGTCCGGAAAGAGACTTGTTCTTCATCGTCAAGGCATTCGCGGCCGGCGTCATTTTGGCAACCGGGTTCATTCACGTTCTTCCCGATTCTTTCGAAAACTTAACTTCACCTTGTTTGAATGAAAATCCATGGGGTAAATTTCCTTTTGCTGGATTTGCAGCAATGGTGGCAGGTATTGGAACTCTTATGGTTGATTCTTATGCAACTTCTTATCTTAATAAGCGGCATCATAATAGCAAGAATGCTCTTCAGCCTCATAACCATGAAAACGATCAAGATGATCATAGCGGTAGGGATTTAGAGATTATTCATAATCATGGAGTTCAGGGTCATGCTCACGGGTCGGACCTGACCTCGATCGACGCTACTCTTAGGCGCCGAGTCATTGCGCAGGTTTTGGAGTTGGGAATCGTAGCACATTCAGTGGTAATCGGAATATCGTTAGGTGCTAATCAAAATCCAAGCGTTATCAAACCTCTCGTTGCTGCCTTGACCTTCCATCAGTTTTTTGAAGGCGTGGGGCTGGGCGGATCCATTAGTCAGGCGAATCTAAAGTCAAAGTCAATAGCAATCATGGCGGTGTTCTTCACACTGACAACTCCGGTCGGGATCGGGATCGGAATGGGAATATCAAGTGTTTATAAGGAAAACAGCCCGACGGCCCTCATTACCGAAGGGTTGTTTAACGGAGCATCAGCTGGAATTTTAATATATATGGCCCTCGTTGACTTTTTGGCAGCGGATTTTATGAACCCAAAACTTCAGCAAAATGGAATGCTTATGTTTGGTTCCAATGTCTCTCTTCTTCTTGGCGCTGGCTTAATGTCCCTAATTGCCAAATGGGCATGA 1059 44.38 MGCSLLAILIFLFLTILPTLILADCTCDESEDEIDKSEARKYKIIAIVTILTGSTTGVFIPLLGKFIPALSPERDLFFIVKAFAAGVILATGFIHVLPDSFENLTSPCLNENPWGKFPFAGFAAMVAGIGTLMVDSYATSYLNKRHHNSKNALQPHNHENDQDDHSGRDLEIIHNHGVQGHAHGSDLTSIDATLRRRVIAQVLELGIVAHSVVIGISLGANQNPSVIKPLVAALTFHQFFEGVGLGGSISQANLKSKSIAIMAVFFTLTTPVGIGIGMGISSVYKENSPTALITEGLFNGASAGILIYMALVDFLAADFMNPKLQQNGMLMFGSNVSLLLGAGLMSLIAKWA 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1053571 1054920 + Conep09aG0025000.1 Cone9ag0247 444410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0247 352 NCBIfam ZIP zinc/iron transport family 25 352 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cone9ag0247 352 PANTHER ZINC/IRON TRANSPORTER 37 351 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cone9ag0247 352 MobiDBLite consensus disorder prediction 148 167 - -
Cone9ag0247 352 Pfam ZIP Zinc transporter 41 349 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone9ag0247 352 MobiDBLite consensus disorder prediction 152 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0233 Cone-Chr6:1078537 Cone9ag0247 Cone-Chr9:1053571 7.14E-83 dispersed
Cone8ag1604 Cone-Chr8:11878688 Cone9ag0247 Cone-Chr9:1053571 9.48E-117 dispersed
Cone9ag0247 Cone-Chr9:1053571 Cone9ag0269 Cone-Chr9:1146817 8.50E-128 dispersed
Cone6ag0216 Cone-Chr6:1023737 Cone9ag0247 Cone-Chr9:1053571 3.11E-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0247 K14709 - vvi:100255284 435.647